Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp35M0QWN7 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Usp35M0QWN7 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Usp35M0QWN7 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp35M0QWN7 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp35M0QWN7 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp35M0QWN7 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Usp35M0QWN7 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp35M0QWN7 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Usp35M0QWN7 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp35M0QWN7 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp35M0QWN7 Gm1401-201ENSMUST00000122048 772 ntBASIC16.81■□□□□ 0.28
Usp35M0QWN7 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp35M0QWN7 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.81■□□□□ 0.28
Usp35M0QWN7 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp35M0QWN7 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Usp35M0QWN7 Gm27525-201ENSMUST00000184465 107 ntBASIC16.81■□□□□ 0.28
Usp35M0QWN7 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Usp35M0QWN7 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.81■□□□□ 0.28
Usp35M0QWN7 Gm37935-201ENSMUST00000192012 982 ntBASIC16.81■□□□□ 0.28
Usp35M0QWN7 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.81■□□□□ 0.28
Usp35M0QWN7 Gm7506-201ENSMUST00000207758 815 ntBASIC16.81■□□□□ 0.28
Usp35M0QWN7 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.81■□□□□ 0.28
Usp35M0QWN7 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Usp35M0QWN7 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.81■□□□□ 0.28
Usp35M0QWN7 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Usp35M0QWN7 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Usp35M0QWN7 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
Usp35M0QWN7 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp35M0QWN7 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Usp35M0QWN7 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Usp35M0QWN7 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp35M0QWN7 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.8■□□□□ 0.28
Usp35M0QWN7 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp35M0QWN7 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp35M0QWN7 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp35M0QWN7 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp35M0QWN7 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp35M0QWN7 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp35M0QWN7 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Usp35M0QWN7 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.8■□□□□ 0.28
Usp35M0QWN7 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.8■□□□□ 0.28
Usp35M0QWN7 Gm4535-201ENSMUST00000182274 558 ntBASIC16.8■□□□□ 0.28
Usp35M0QWN7 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.8■□□□□ 0.28
Usp35M0QWN7 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.8■□□□□ 0.28
Usp35M0QWN7 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.8■□□□□ 0.28
Usp35M0QWN7 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp35M0QWN7 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp35M0QWN7 Gm10355-201ENSMUST00000097146 517 ntBASIC16.8■□□□□ 0.28
Usp35M0QWN7 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
Usp35M0QWN7 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp35M0QWN7 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp35M0QWN7 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Usp35M0QWN7 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp35M0QWN7 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.8■□□□□ 0.28
Usp35M0QWN7 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp35M0QWN7 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp35M0QWN7 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp35M0QWN7 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Usp35M0QWN7 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Usp35M0QWN7 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp35M0QWN7 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp35M0QWN7 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp35M0QWN7 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp35M0QWN7 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Usp35M0QWN7 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp35M0QWN7 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Usp35M0QWN7 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Usp35M0QWN7 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Usp35M0QWN7 Gm12350-201ENSMUST00000121208 462 ntBASIC16.79■□□□□ 0.28
Usp35M0QWN7 Gm36967-201ENSMUST00000193814 266 ntBASIC16.79■□□□□ 0.28
Usp35M0QWN7 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Usp35M0QWN7 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp35M0QWN7 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Usp35M0QWN7 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Usp35M0QWN7 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Usp35M0QWN7 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp35M0QWN7 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Usp35M0QWN7 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp35M0QWN7 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp35M0QWN7 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Usp35M0QWN7 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp35M0QWN7 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp35M0QWN7 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.78■□□□□ 0.28
Usp35M0QWN7 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Usp35M0QWN7 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp35M0QWN7 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp35M0QWN7 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Usp35M0QWN7 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Usp35M0QWN7 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp35M0QWN7 Gm25990-201ENSMUST00000102440 86 ntBASIC16.78■□□□□ 0.28
Usp35M0QWN7 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.78■□□□□ 0.28
Usp35M0QWN7 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.78■□□□□ 0.28
Usp35M0QWN7 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.78■□□□□ 0.28
Usp35M0QWN7 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.78■□□□□ 0.28
Usp35M0QWN7 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.78■□□□□ 0.28
Usp35M0QWN7 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp35M0QWN7 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Usp35M0QWN7 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Usp35M0QWN7 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms