Protein–RNA interactions for Protein: J3QMS7

Gm11236, Predicted gene 11236, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11236J3QMS7 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm11236J3QMS7 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm11236J3QMS7 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm11236J3QMS7 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm11236J3QMS7 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Gm11236J3QMS7 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm11236J3QMS7 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm11236J3QMS7 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gm11236J3QMS7 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Gm11236J3QMS7 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm11236J3QMS7 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm11236J3QMS7 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm11236J3QMS7 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gm11236J3QMS7 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm11236J3QMS7 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm11236J3QMS7 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm11236J3QMS7 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Gm11236J3QMS7 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm11236J3QMS7 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.31■□□□□ 0.2
Gm11236J3QMS7 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC16.31■□□□□ 0.2
Gm11236J3QMS7 Gm13365-201ENSMUST00000121188 973 ntBASIC16.31■□□□□ 0.2
Gm11236J3QMS7 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm11236J3QMS7 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Gm11236J3QMS7 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gm11236J3QMS7 Gm10576-201ENSMUST00000191927 825 ntBASIC16.31■□□□□ 0.2
Gm11236J3QMS7 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC16.31■□□□□ 0.2
Gm11236J3QMS7 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.31■□□□□ 0.2
Gm11236J3QMS7 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC16.31■□□□□ 0.2
Gm11236J3QMS7 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gm11236J3QMS7 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC16.31■□□□□ 0.2
Gm11236J3QMS7 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Gm11236J3QMS7 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm11236J3QMS7 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm11236J3QMS7 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm11236J3QMS7 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm11236J3QMS7 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gm11236J3QMS7 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm11236J3QMS7 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm11236J3QMS7 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gm11236J3QMS7 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Gm11236J3QMS7 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.3■□□□□ 0.2
Gm11236J3QMS7 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm11236J3QMS7 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm11236J3QMS7 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm11236J3QMS7 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm11236J3QMS7 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm11236J3QMS7 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Gm11236J3QMS7 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Gm11236J3QMS7 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm11236J3QMS7 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm11236J3QMS7 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm11236J3QMS7 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm11236J3QMS7 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Gm11236J3QMS7 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Gm11236J3QMS7 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gm11236J3QMS7 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.3■□□□□ 0.2
Gm11236J3QMS7 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.3■□□□□ 0.2
Gm11236J3QMS7 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gm11236J3QMS7 Gm20553-201ENSMUST00000204205 844 ntBASIC16.3■□□□□ 0.2
Gm11236J3QMS7 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.3■□□□□ 0.2
Gm11236J3QMS7 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm11236J3QMS7 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Gm11236J3QMS7 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Gm11236J3QMS7 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm11236J3QMS7 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm11236J3QMS7 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm11236J3QMS7 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Gm11236J3QMS7 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm11236J3QMS7 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gm11236J3QMS7 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm11236J3QMS7 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm11236J3QMS7 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm11236J3QMS7 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Gm11236J3QMS7 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm11236J3QMS7 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm11236J3QMS7 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Gm11236J3QMS7 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm11236J3QMS7 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm11236J3QMS7 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm11236J3QMS7 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm11236J3QMS7 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC16.29■□□□□ 0.2
Gm11236J3QMS7 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm11236J3QMS7 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm11236J3QMS7 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Gm11236J3QMS7 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Gm11236J3QMS7 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm11236J3QMS7 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.29■□□□□ 0.2
Gm11236J3QMS7 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.29■□□□□ 0.2
Gm11236J3QMS7 Rpph1-201ENSMUST00000175096 319 ntBASIC16.29■□□□□ 0.2
Gm11236J3QMS7 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Gm11236J3QMS7 Gm5312-201ENSMUST00000203728 547 ntBASIC16.29■□□□□ 0.2
Gm11236J3QMS7 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC16.29■□□□□ 0.2
Gm11236J3QMS7 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.29■□□□□ 0.2
Gm11236J3QMS7 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Gm11236J3QMS7 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm11236J3QMS7 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm11236J3QMS7 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm11236J3QMS7 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm11236J3QMS7 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm11236J3QMS7 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms