Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Herc1E9PZP8 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Herc1E9PZP8 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Herc1E9PZP8 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Herc1E9PZP8 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Herc1E9PZP8 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Herc1E9PZP8 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC8.67□□□□□ -1.02
Herc1E9PZP8 Gm12341-201ENSMUST00000119724 503 ntBASIC8.67□□□□□ -1.02
Herc1E9PZP8 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC8.67□□□□□ -1.02
Herc1E9PZP8 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC8.67□□□□□ -1.02
Herc1E9PZP8 CT573034.1-201ENSMUST00000222983 313 ntBASIC8.67□□□□□ -1.02
Herc1E9PZP8 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Herc1E9PZP8 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Herc1E9PZP8 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Herc1E9PZP8 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC8.67□□□□□ -1.02
Herc1E9PZP8 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Herc1E9PZP8 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Herc1E9PZP8 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Herc1E9PZP8 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Herc1E9PZP8 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Herc1E9PZP8 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Herc1E9PZP8 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Herc1E9PZP8 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Herc1E9PZP8 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Herc1E9PZP8 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Herc1E9PZP8 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
Herc1E9PZP8 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC8.67□□□□□ -1.02
Herc1E9PZP8 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Herc1E9PZP8 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC8.67□□□□□ -1.02
Herc1E9PZP8 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC8.67□□□□□ -1.02
Herc1E9PZP8 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Herc1E9PZP8 Gm12384-201ENSMUST00000119228 919 ntBASIC8.67□□□□□ -1.02
Herc1E9PZP8 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC8.67□□□□□ -1.02
Herc1E9PZP8 Gm17794-201ENSMUST00000220252 955 ntBASIC8.67□□□□□ -1.02
Herc1E9PZP8 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC8.67□□□□□ -1.02
Herc1E9PZP8 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Herc1E9PZP8 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Herc1E9PZP8 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC8.67□□□□□ -1.02
Herc1E9PZP8 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Herc1E9PZP8 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC8.67□□□□□ -1.02
Herc1E9PZP8 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Herc1E9PZP8 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Herc1E9PZP8 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Herc1E9PZP8 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC8.66□□□□□ -1.02
Herc1E9PZP8 Gm16505-201ENSMUST00000179981 232 ntBASIC8.66□□□□□ -1.02
Herc1E9PZP8 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Herc1E9PZP8 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC8.66□□□□□ -1.02
Herc1E9PZP8 D9Wsu149-201ENSMUST00000214169 594 ntBASIC8.66□□□□□ -1.02
Herc1E9PZP8 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC8.66□□□□□ -1.02
Herc1E9PZP8 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Herc1E9PZP8 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Herc1E9PZP8 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Herc1E9PZP8 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Herc1E9PZP8 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Herc1E9PZP8 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Herc1E9PZP8 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Herc1E9PZP8 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Herc1E9PZP8 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Herc1E9PZP8 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Herc1E9PZP8 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC8.66□□□□□ -1.02
Herc1E9PZP8 Gm7558-201ENSMUST00000193221 1165 ntBASIC8.66□□□□□ -1.02
Herc1E9PZP8 AC155286.1-201ENSMUST00000218632 448 ntBASIC8.66□□□□□ -1.02
Herc1E9PZP8 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC8.66□□□□□ -1.02
Herc1E9PZP8 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Herc1E9PZP8 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Herc1E9PZP8 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Herc1E9PZP8 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Herc1E9PZP8 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC8.66□□□□□ -1.02
Herc1E9PZP8 Mir1897-201ENSMUST00000122581 272 ntBASIC8.66□□□□□ -1.02
Herc1E9PZP8 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC8.66□□□□□ -1.02
Herc1E9PZP8 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Herc1E9PZP8 Gm2272-201ENSMUST00000194903 582 ntBASIC8.66□□□□□ -1.02
Herc1E9PZP8 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Herc1E9PZP8 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Herc1E9PZP8 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Herc1E9PZP8 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Herc1E9PZP8 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
Herc1E9PZP8 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Herc1E9PZP8 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Herc1E9PZP8 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Herc1E9PZP8 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Herc1E9PZP8 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC8.66□□□□□ -1.02
Herc1E9PZP8 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC8.66□□□□□ -1.02
Herc1E9PZP8 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC8.66□□□□□ -1.02
Herc1E9PZP8 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Herc1E9PZP8 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
Herc1E9PZP8 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC8.65□□□□□ -1.02
Herc1E9PZP8 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Herc1E9PZP8 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Herc1E9PZP8 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC8.65□□□□□ -1.02
Herc1E9PZP8 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC8.65□□□□□ -1.02
Herc1E9PZP8 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Herc1E9PZP8 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Herc1E9PZP8 AC154527.2-201ENSMUST00000225256 1466 ntBASIC8.65□□□□□ -1.02
Herc1E9PZP8 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Herc1E9PZP8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Herc1E9PZP8 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC8.65□□□□□ -1.02
Herc1E9PZP8 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Herc1E9PZP8 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Herc1E9PZP8 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms