Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Scaf11E9PZM7 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Scaf11E9PZM7 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Scaf11E9PZM7 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Scaf11E9PZM7 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Scaf11E9PZM7 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Scaf11E9PZM7 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Scaf11E9PZM7 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
Scaf11E9PZM7 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Scaf11E9PZM7 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Scaf11E9PZM7 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Scaf11E9PZM7 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC21.65■■□□□ 1.06
Scaf11E9PZM7 Gm14767-201ENSMUST00000121559 586 ntBASIC21.65■■□□□ 1.06
Scaf11E9PZM7 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC21.65■■□□□ 1.06
Scaf11E9PZM7 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Scaf11E9PZM7 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Scaf11E9PZM7 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Scaf11E9PZM7 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Scaf11E9PZM7 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
Scaf11E9PZM7 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Scaf11E9PZM7 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Scaf11E9PZM7 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Scaf11E9PZM7 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Scaf11E9PZM7 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC21.64■■□□□ 1.06
Scaf11E9PZM7 Gm18737-201ENSMUST00000173594 937 ntBASIC21.64■■□□□ 1.06
Scaf11E9PZM7 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC21.64■■□□□ 1.06
Scaf11E9PZM7 AL593843.1-201ENSMUST00000195891 145 ntBASIC21.64■■□□□ 1.06
Scaf11E9PZM7 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Scaf11E9PZM7 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Scaf11E9PZM7 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Scaf11E9PZM7 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.06
Scaf11E9PZM7 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Scaf11E9PZM7 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Scaf11E9PZM7 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Scaf11E9PZM7 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Scaf11E9PZM7 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Scaf11E9PZM7 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Scaf11E9PZM7 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Scaf11E9PZM7 Gm15321-201ENSMUST00000121290 288 ntBASIC21.64■■□□□ 1.05
Scaf11E9PZM7 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC21.64■■□□□ 1.05
Scaf11E9PZM7 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Scaf11E9PZM7 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC21.64■■□□□ 1.05
Scaf11E9PZM7 Gm5357-201ENSMUST00000212720 1924 ntBASIC21.64■■□□□ 1.05
Scaf11E9PZM7 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Scaf11E9PZM7 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scaf11E9PZM7 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scaf11E9PZM7 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scaf11E9PZM7 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scaf11E9PZM7 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Scaf11E9PZM7 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scaf11E9PZM7 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC21.63■■□□□ 1.05
Scaf11E9PZM7 AC130669.1-201ENSMUST00000228537 1672 ntBASIC21.63■■□□□ 1.05
Scaf11E9PZM7 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
Scaf11E9PZM7 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scaf11E9PZM7 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC21.63■■□□□ 1.05
Scaf11E9PZM7 Gm44719-201ENSMUST00000206404 149 ntBASIC21.63■■□□□ 1.05
Scaf11E9PZM7 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC21.63■■□□□ 1.05
Scaf11E9PZM7 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scaf11E9PZM7 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Scaf11E9PZM7 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scaf11E9PZM7 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scaf11E9PZM7 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC21.62■■□□□ 1.05
Scaf11E9PZM7 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scaf11E9PZM7 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scaf11E9PZM7 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Scaf11E9PZM7 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scaf11E9PZM7 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Scaf11E9PZM7 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scaf11E9PZM7 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Scaf11E9PZM7 Gm27838-201ENSMUST00000184829 128 ntBASIC21.62■■□□□ 1.05
Scaf11E9PZM7 AC154239.3-201ENSMUST00000226933 674 ntBASIC21.62■■□□□ 1.05
Scaf11E9PZM7 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scaf11E9PZM7 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scaf11E9PZM7 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Scaf11E9PZM7 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scaf11E9PZM7 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC21.62■■□□□ 1.05
Scaf11E9PZM7 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
Scaf11E9PZM7 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Scaf11E9PZM7 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC21.61■■□□□ 1.05
Scaf11E9PZM7 Gm12859-201ENSMUST00000117834 427 ntBASIC21.61■■□□□ 1.05
Scaf11E9PZM7 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC21.61■■□□□ 1.05
Scaf11E9PZM7 Gm24694-201ENSMUST00000180054 110 ntBASIC21.61■■□□□ 1.05
Scaf11E9PZM7 Gm27663-201ENSMUST00000184839 110 ntBASIC21.61■■□□□ 1.05
Scaf11E9PZM7 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Scaf11E9PZM7 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Scaf11E9PZM7 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Scaf11E9PZM7 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Scaf11E9PZM7 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Scaf11E9PZM7 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Scaf11E9PZM7 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Scaf11E9PZM7 Gm26596-201ENSMUST00000180464 2655 ntBASIC21.61■■□□□ 1.05
Scaf11E9PZM7 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Scaf11E9PZM7 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC21.6■■□□□ 1.05
Scaf11E9PZM7 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Scaf11E9PZM7 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Scaf11E9PZM7 Gm7286-201ENSMUST00000182691 1007 ntBASIC21.6■■□□□ 1.05
Scaf11E9PZM7 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Scaf11E9PZM7 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Scaf11E9PZM7 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Scaf11E9PZM7 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms