Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col6a3E9PWQ3 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col6a3E9PWQ3 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col6a3E9PWQ3 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Col6a3E9PWQ3 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC15.52■□□□□ 0.07
Col6a3E9PWQ3 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
Col6a3E9PWQ3 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col6a3E9PWQ3 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Col6a3E9PWQ3 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Col6a3E9PWQ3 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Col6a3E9PWQ3 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col6a3E9PWQ3 Gm23931-201ENSMUST00000103842 109 ntBASIC15.51■□□□□ 0.07
Col6a3E9PWQ3 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col6a3E9PWQ3 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Col6a3E9PWQ3 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC15.51■□□□□ 0.07
Col6a3E9PWQ3 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col6a3E9PWQ3 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.51■□□□□ 0.07
Col6a3E9PWQ3 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Col6a3E9PWQ3 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col6a3E9PWQ3 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Col6a3E9PWQ3 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col6a3E9PWQ3 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Col6a3E9PWQ3 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC15.51■□□□□ 0.07
Col6a3E9PWQ3 Gm2272-201ENSMUST00000194903 582 ntBASIC15.51■□□□□ 0.07
Col6a3E9PWQ3 AC155637.1-201ENSMUST00000218560 636 ntBASIC15.51■□□□□ 0.07
Col6a3E9PWQ3 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC15.51■□□□□ 0.07
Col6a3E9PWQ3 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Col6a3E9PWQ3 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col6a3E9PWQ3 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col6a3E9PWQ3 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col6a3E9PWQ3 Gm5320-201ENSMUST00000207163 1519 ntBASIC15.5■□□□□ 0.07
Col6a3E9PWQ3 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col6a3E9PWQ3 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col6a3E9PWQ3 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.5■□□□□ 0.07
Col6a3E9PWQ3 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col6a3E9PWQ3 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col6a3E9PWQ3 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.5■□□□□ 0.07
Col6a3E9PWQ3 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col6a3E9PWQ3 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col6a3E9PWQ3 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col6a3E9PWQ3 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Col6a3E9PWQ3 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col6a3E9PWQ3 Trav4d-2-201ENSMUST00000120914 335 ntBASIC15.5■□□□□ 0.07
Col6a3E9PWQ3 Gm27243-201ENSMUST00000183964 521 ntBASIC15.5■□□□□ 0.07
Col6a3E9PWQ3 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col6a3E9PWQ3 Gm44608-201ENSMUST00000206827 855 ntBASIC15.5■□□□□ 0.07
Col6a3E9PWQ3 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col6a3E9PWQ3 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col6a3E9PWQ3 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col6a3E9PWQ3 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col6a3E9PWQ3 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col6a3E9PWQ3 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col6a3E9PWQ3 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col6a3E9PWQ3 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col6a3E9PWQ3 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
Col6a3E9PWQ3 Ldha-ps-201ENSMUST00000119390 995 ntBASIC15.49■□□□□ 0.07
Col6a3E9PWQ3 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC15.49■□□□□ 0.07
Col6a3E9PWQ3 Gm12134-201ENSMUST00000122109 520 ntBASIC15.49■□□□□ 0.07
Col6a3E9PWQ3 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC15.49■□□□□ 0.07
Col6a3E9PWQ3 Gm27572-201ENSMUST00000183702 255 ntBASIC15.49■□□□□ 0.07
Col6a3E9PWQ3 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC15.49■□□□□ 0.07
Col6a3E9PWQ3 Gm29787-201ENSMUST00000222129 849 ntBASIC15.49■□□□□ 0.07
Col6a3E9PWQ3 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col6a3E9PWQ3 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col6a3E9PWQ3 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col6a3E9PWQ3 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Col6a3E9PWQ3 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.49■□□□□ 0.07
Col6a3E9PWQ3 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col6a3E9PWQ3 Gm29199-201ENSMUST00000187766 775 ntBASIC15.49■□□□□ 0.07
Col6a3E9PWQ3 Gm7067-201ENSMUST00000207698 1249 ntBASIC15.49■□□□□ 0.07
Col6a3E9PWQ3 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Col6a3E9PWQ3 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Col6a3E9PWQ3 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col6a3E9PWQ3 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col6a3E9PWQ3 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col6a3E9PWQ3 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col6a3E9PWQ3 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col6a3E9PWQ3 Gm5940-201ENSMUST00000117582 1068 ntBASIC15.49■□□□□ 0.07
Col6a3E9PWQ3 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Col6a3E9PWQ3 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Col6a3E9PWQ3 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.49■□□□□ 0.07
Col6a3E9PWQ3 Gm7399-201ENSMUST00000032395 858 ntBASIC15.49■□□□□ 0.07
Col6a3E9PWQ3 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.49■□□□□ 0.07
Col6a3E9PWQ3 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col6a3E9PWQ3 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col6a3E9PWQ3 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col6a3E9PWQ3 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col6a3E9PWQ3 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Col6a3E9PWQ3 Gm6244-201ENSMUST00000178732 841 ntBASIC15.48■□□□□ 0.07
Col6a3E9PWQ3 Gm4857-201ENSMUST00000192718 785 ntBASIC15.48■□□□□ 0.07
Col6a3E9PWQ3 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Col6a3E9PWQ3 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col6a3E9PWQ3 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col6a3E9PWQ3 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col6a3E9PWQ3 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col6a3E9PWQ3 Gm13350-201ENSMUST00000120519 479 ntBASIC15.48■□□□□ 0.07
Col6a3E9PWQ3 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Col6a3E9PWQ3 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Col6a3E9PWQ3 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col6a3E9PWQ3 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms