Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.01□□□□□ -0.17
Shank1D3YZU1 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shank1D3YZU1 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Shank1D3YZU1 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shank1D3YZU1 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Shank1D3YZU1 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shank1D3YZU1 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shank1D3YZU1 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC14.01□□□□□ -0.17
Shank1D3YZU1 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Shank1D3YZU1 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shank1D3YZU1 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Shank1D3YZU1 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
Shank1D3YZU1 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14□□□□□ -0.17
Shank1D3YZU1 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Shank1D3YZU1 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14□□□□□ -0.17
Shank1D3YZU1 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shank1D3YZU1 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14□□□□□ -0.17
Shank1D3YZU1 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Shank1D3YZU1 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shank1D3YZU1 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shank1D3YZU1 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Shank1D3YZU1 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Shank1D3YZU1 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14□□□□□ -0.17
Shank1D3YZU1 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14□□□□□ -0.17
Shank1D3YZU1 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14□□□□□ -0.17
Shank1D3YZU1 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Shank1D3YZU1 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Shank1D3YZU1 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Shank1D3YZU1 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shank1D3YZU1 Gm43338-201ENSMUST00000198617 2223 ntBASIC14□□□□□ -0.17
Shank1D3YZU1 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shank1D3YZU1 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14□□□□□ -0.17
Shank1D3YZU1 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Shank1D3YZU1 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14□□□□□ -0.17
Shank1D3YZU1 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shank1D3YZU1 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shank1D3YZU1 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shank1D3YZU1 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC13.99□□□□□ -0.17
Shank1D3YZU1 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shank1D3YZU1 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Shank1D3YZU1 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Shank1D3YZU1 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.99□□□□□ -0.17
Shank1D3YZU1 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Shank1D3YZU1 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Shank1D3YZU1 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.99□□□□□ -0.17
Shank1D3YZU1 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.99□□□□□ -0.17
Shank1D3YZU1 Gm18246-201ENSMUST00000221023 728 ntBASIC13.99□□□□□ -0.17
Shank1D3YZU1 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Shank1D3YZU1 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Shank1D3YZU1 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shank1D3YZU1 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shank1D3YZU1 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shank1D3YZU1 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Shank1D3YZU1 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shank1D3YZU1 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Shank1D3YZU1 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.99□□□□□ -0.17
Shank1D3YZU1 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Shank1D3YZU1 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Shank1D3YZU1 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.99□□□□□ -0.17
Shank1D3YZU1 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Shank1D3YZU1 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.99□□□□□ -0.17
Shank1D3YZU1 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shank1D3YZU1 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Shank1D3YZU1 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shank1D3YZU1 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shank1D3YZU1 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shank1D3YZU1 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shank1D3YZU1 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shank1D3YZU1 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shank1D3YZU1 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shank1D3YZU1 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shank1D3YZU1 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shank1D3YZU1 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shank1D3YZU1 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shank1D3YZU1 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Shank1D3YZU1 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.98□□□□□ -0.17
Shank1D3YZU1 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shank1D3YZU1 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Shank1D3YZU1 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shank1D3YZU1 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shank1D3YZU1 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.98□□□□□ -0.17
Shank1D3YZU1 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.98□□□□□ -0.17
Shank1D3YZU1 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.98□□□□□ -0.17
Shank1D3YZU1 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shank1D3YZU1 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shank1D3YZU1 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shank1D3YZU1 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shank1D3YZU1 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shank1D3YZU1 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shank1D3YZU1 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shank1D3YZU1 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shank1D3YZU1 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Shank1D3YZU1 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Shank1D3YZU1 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shank1D3YZU1 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shank1D3YZU1 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shank1D3YZU1 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shank1D3YZU1 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shank1D3YZU1 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shank1D3YZU1 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms