Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp42B2RQC2 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp42B2RQC2 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Usp42B2RQC2 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp42B2RQC2 Gm14722-201ENSMUST00000118943 689 ntBASIC18.31■□□□□ 0.52
Usp42B2RQC2 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.31■□□□□ 0.52
Usp42B2RQC2 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.31■□□□□ 0.52
Usp42B2RQC2 AC160980.1-201ENSMUST00000224136 970 ntBASIC18.31■□□□□ 0.52
Usp42B2RQC2 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Usp42B2RQC2 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.31■□□□□ 0.52
Usp42B2RQC2 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Usp42B2RQC2 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp42B2RQC2 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC18.31■□□□□ 0.52
Usp42B2RQC2 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp42B2RQC2 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Usp42B2RQC2 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.31■□□□□ 0.52
Usp42B2RQC2 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC18.31■□□□□ 0.52
Usp42B2RQC2 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Usp42B2RQC2 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.31■□□□□ 0.52
Usp42B2RQC2 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp42B2RQC2 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp42B2RQC2 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Usp42B2RQC2 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp42B2RQC2 Gm7230-201ENSMUST00000173026 815 ntBASIC18.3■□□□□ 0.52
Usp42B2RQC2 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Usp42B2RQC2 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp42B2RQC2 AC122024.2-201ENSMUST00000220086 871 ntBASIC18.3■□□□□ 0.52
Usp42B2RQC2 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.3■□□□□ 0.52
Usp42B2RQC2 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp42B2RQC2 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Usp42B2RQC2 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp42B2RQC2 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Usp42B2RQC2 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp42B2RQC2 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp42B2RQC2 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp42B2RQC2 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC18.3■□□□□ 0.52
Usp42B2RQC2 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp42B2RQC2 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp42B2RQC2 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp42B2RQC2 Gm42901-201ENSMUST00000197735 3171 ntBASIC18.3■□□□□ 0.52
Usp42B2RQC2 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Usp42B2RQC2 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Usp42B2RQC2 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp42B2RQC2 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp42B2RQC2 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC18.29■□□□□ 0.52
Usp42B2RQC2 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC18.29■□□□□ 0.52
Usp42B2RQC2 Gm7286-201ENSMUST00000182691 1007 ntBASIC18.29■□□□□ 0.52
Usp42B2RQC2 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Usp42B2RQC2 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp42B2RQC2 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp42B2RQC2 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Usp42B2RQC2 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp42B2RQC2 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp42B2RQC2 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp42B2RQC2 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp42B2RQC2 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC18.29■□□□□ 0.52
Usp42B2RQC2 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp42B2RQC2 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp42B2RQC2 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp42B2RQC2 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp42B2RQC2 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp42B2RQC2 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp42B2RQC2 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Usp42B2RQC2 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.28■□□□□ 0.52
Usp42B2RQC2 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.28■□□□□ 0.52
Usp42B2RQC2 Gm2308-201ENSMUST00000166539 1004 ntBASIC18.28■□□□□ 0.52
Usp42B2RQC2 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18.28■□□□□ 0.52
Usp42B2RQC2 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp42B2RQC2 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Usp42B2RQC2 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp42B2RQC2 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Usp42B2RQC2 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp42B2RQC2 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp42B2RQC2 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp42B2RQC2 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp42B2RQC2 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
Usp42B2RQC2 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Usp42B2RQC2 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Usp42B2RQC2 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Usp42B2RQC2 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp42B2RQC2 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp42B2RQC2 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Usp42B2RQC2 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp42B2RQC2 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC18.27■□□□□ 0.52
Usp42B2RQC2 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC18.27■□□□□ 0.52
Usp42B2RQC2 Gm37500-201ENSMUST00000192059 1443 ntBASIC18.27■□□□□ 0.52
Usp42B2RQC2 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp42B2RQC2 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
Usp42B2RQC2 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Usp42B2RQC2 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp42B2RQC2 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Usp42B2RQC2 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp42B2RQC2 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.26■□□□□ 0.51
Usp42B2RQC2 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.26■□□□□ 0.51
Usp42B2RQC2 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Usp42B2RQC2 Gm5682-201ENSMUST00000173402 505 ntBASIC18.26■□□□□ 0.51
Usp42B2RQC2 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC18.26■□□□□ 0.51
Usp42B2RQC2 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp42B2RQC2 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp42B2RQC2 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms