Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Krt28A6BLY7 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Krt28A6BLY7 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Krt28A6BLY7 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Krt28A6BLY7 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Krt28A6BLY7 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.32■□□□□ 0.36
Krt28A6BLY7 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.32■□□□□ 0.36
Krt28A6BLY7 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Krt28A6BLY7 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Krt28A6BLY7 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Krt28A6BLY7 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC17.32■□□□□ 0.36
Krt28A6BLY7 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Krt28A6BLY7 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Krt28A6BLY7 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.32■□□□□ 0.36
Krt28A6BLY7 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC17.32■□□□□ 0.36
Krt28A6BLY7 Gm27306-201ENSMUST00000183970 107 ntBASIC17.32■□□□□ 0.36
Krt28A6BLY7 Gm17837-201ENSMUST00000186435 985 ntBASIC17.32■□□□□ 0.36
Krt28A6BLY7 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.32■□□□□ 0.36
Krt28A6BLY7 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Krt28A6BLY7 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.32■□□□□ 0.36
Krt28A6BLY7 Gm10154-201ENSMUST00000084445 354 ntBASIC17.32■□□□□ 0.36
Krt28A6BLY7 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Krt28A6BLY7 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Krt28A6BLY7 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.31■□□□□ 0.36
Krt28A6BLY7 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Krt28A6BLY7 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Krt28A6BLY7 Gm13223-201ENSMUST00000118609 747 ntBASIC17.31■□□□□ 0.36
Krt28A6BLY7 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.31■□□□□ 0.36
Krt28A6BLY7 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Krt28A6BLY7 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.31■□□□□ 0.36
Krt28A6BLY7 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.31■□□□□ 0.36
Krt28A6BLY7 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Krt28A6BLY7 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Krt28A6BLY7 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Krt28A6BLY7 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Krt28A6BLY7 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Krt28A6BLY7 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Krt28A6BLY7 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Krt28A6BLY7 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Krt28A6BLY7 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Krt28A6BLY7 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Krt28A6BLY7 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Krt28A6BLY7 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Krt28A6BLY7 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Krt28A6BLY7 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Krt28A6BLY7 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Krt28A6BLY7 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Krt28A6BLY7 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Krt28A6BLY7 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Krt28A6BLY7 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Krt28A6BLY7 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Krt28A6BLY7 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Krt28A6BLY7 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.3■□□□□ 0.36
Krt28A6BLY7 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Krt28A6BLY7 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Krt28A6BLY7 Gm27618-201ENSMUST00000183671 60 ntBASIC17.3■□□□□ 0.36
Krt28A6BLY7 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.3■□□□□ 0.36
Krt28A6BLY7 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.3■□□□□ 0.36
Krt28A6BLY7 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.3■□□□□ 0.36
Krt28A6BLY7 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.3■□□□□ 0.36
Krt28A6BLY7 CT030684.1-201ENSMUST00000227292 914 ntBASIC17.3■□□□□ 0.36
Krt28A6BLY7 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Krt28A6BLY7 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Krt28A6BLY7 Gm2423-201ENSMUST00000074863 733 ntBASIC17.3■□□□□ 0.36
Krt28A6BLY7 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Krt28A6BLY7 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Krt28A6BLY7 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Krt28A6BLY7 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Krt28A6BLY7 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Krt28A6BLY7 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Krt28A6BLY7 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.3■□□□□ 0.36
Krt28A6BLY7 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Krt28A6BLY7 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Krt28A6BLY7 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Krt28A6BLY7 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Krt28A6BLY7 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Krt28A6BLY7 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.29■□□□□ 0.36
Krt28A6BLY7 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Krt28A6BLY7 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.29■□□□□ 0.36
Krt28A6BLY7 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Krt28A6BLY7 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Krt28A6BLY7 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Krt28A6BLY7 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.29■□□□□ 0.36
Krt28A6BLY7 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Krt28A6BLY7 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Krt28A6BLY7 Gm15693-201ENSMUST00000120470 637 ntBASIC17.29■□□□□ 0.36
Krt28A6BLY7 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC17.29■□□□□ 0.36
Krt28A6BLY7 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC17.29■□□□□ 0.36
Krt28A6BLY7 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.29■□□□□ 0.36
Krt28A6BLY7 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Krt28A6BLY7 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Krt28A6BLY7 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Krt28A6BLY7 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.29■□□□□ 0.36
Krt28A6BLY7 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Krt28A6BLY7 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Krt28A6BLY7 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Krt28A6BLY7 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Krt28A6BLY7 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Krt28A6BLY7 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Krt28A6BLY7 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms