Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn1aA2APX8 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Scn1aA2APX8 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn1aA2APX8 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn1aA2APX8 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn1aA2APX8 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Scn1aA2APX8 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn1aA2APX8 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn1aA2APX8 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn1aA2APX8 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn1aA2APX8 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn1aA2APX8 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
Scn1aA2APX8 Gm17968-201ENSMUST00000194902 784 ntBASIC16.35■□□□□ 0.21
Scn1aA2APX8 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.35■□□□□ 0.21
Scn1aA2APX8 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn1aA2APX8 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn1aA2APX8 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.35■□□□□ 0.21
Scn1aA2APX8 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Scn1aA2APX8 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn1aA2APX8 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Scn1aA2APX8 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.35■□□□□ 0.21
Scn1aA2APX8 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Scn1aA2APX8 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.35■□□□□ 0.21
Scn1aA2APX8 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Scn1aA2APX8 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Scn1aA2APX8 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn1aA2APX8 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Scn1aA2APX8 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn1aA2APX8 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Scn1aA2APX8 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn1aA2APX8 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn1aA2APX8 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn1aA2APX8 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn1aA2APX8 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Scn1aA2APX8 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Scn1aA2APX8 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn1aA2APX8 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn1aA2APX8 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn1aA2APX8 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.34■□□□□ 0.21
Scn1aA2APX8 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Scn1aA2APX8 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Scn1aA2APX8 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.34■□□□□ 0.21
Scn1aA2APX8 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn1aA2APX8 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Scn1aA2APX8 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn1aA2APX8 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn1aA2APX8 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.33■□□□□ 0.21
Scn1aA2APX8 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Scn1aA2APX8 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.33■□□□□ 0.21
Scn1aA2APX8 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.21
Scn1aA2APX8 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Scn1aA2APX8 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Scn1aA2APX8 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Scn1aA2APX8 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Scn1aA2APX8 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Scn1aA2APX8 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.33■□□□□ 0.2
Scn1aA2APX8 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn1aA2APX8 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn1aA2APX8 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn1aA2APX8 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Scn1aA2APX8 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn1aA2APX8 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn1aA2APX8 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.33■□□□□ 0.2
Scn1aA2APX8 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn1aA2APX8 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn1aA2APX8 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn1aA2APX8 Gm8000-201ENSMUST00000188378 592 ntBASIC16.33■□□□□ 0.2
Scn1aA2APX8 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.33■□□□□ 0.2
Scn1aA2APX8 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn1aA2APX8 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn1aA2APX8 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.33■□□□□ 0.2
Scn1aA2APX8 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn1aA2APX8 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.33■□□□□ 0.2
Scn1aA2APX8 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Scn1aA2APX8 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn1aA2APX8 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn1aA2APX8 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn1aA2APX8 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn1aA2APX8 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Scn1aA2APX8 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.32■□□□□ 0.2
Scn1aA2APX8 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn1aA2APX8 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn1aA2APX8 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.32■□□□□ 0.2
Scn1aA2APX8 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn1aA2APX8 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn1aA2APX8 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.32■□□□□ 0.2
Scn1aA2APX8 Gm5177-201ENSMUST00000183092 997 ntBASIC16.32■□□□□ 0.2
Scn1aA2APX8 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.32■□□□□ 0.2
Scn1aA2APX8 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.32■□□□□ 0.2
Scn1aA2APX8 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Scn1aA2APX8 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn1aA2APX8 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.32■□□□□ 0.2
Scn1aA2APX8 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn1aA2APX8 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn1aA2APX8 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn1aA2APX8 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn1aA2APX8 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Scn1aA2APX8 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scn1aA2APX8 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scn1aA2APX8 Mir3113-201ENSMUST00000175478 76 ntBASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms