Protein–RNA interactions for Protein: A2APF3

Ctcfl, Transcriptional repressor CTCFL, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcflA2APF3 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
CtcflA2APF3 Mir1199-201ENSMUST00000117015 119 ntBASIC14.33□□□□□ -0.12
CtcflA2APF3 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CtcflA2APF3 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.33□□□□□ -0.12
CtcflA2APF3 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CtcflA2APF3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CtcflA2APF3 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CtcflA2APF3 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.33□□□□□ -0.12
CtcflA2APF3 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CtcflA2APF3 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CtcflA2APF3 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CtcflA2APF3 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CtcflA2APF3 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CtcflA2APF3 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CtcflA2APF3 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CtcflA2APF3 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CtcflA2APF3 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CtcflA2APF3 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CtcflA2APF3 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CtcflA2APF3 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.32□□□□□ -0.12
CtcflA2APF3 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CtcflA2APF3 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CtcflA2APF3 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.32□□□□□ -0.12
CtcflA2APF3 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CtcflA2APF3 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CtcflA2APF3 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CtcflA2APF3 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CtcflA2APF3 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CtcflA2APF3 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CtcflA2APF3 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CtcflA2APF3 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CtcflA2APF3 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CtcflA2APF3 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.32□□□□□ -0.12
CtcflA2APF3 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CtcflA2APF3 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CtcflA2APF3 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CtcflA2APF3 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CtcflA2APF3 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CtcflA2APF3 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CtcflA2APF3 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CtcflA2APF3 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CtcflA2APF3 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CtcflA2APF3 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CtcflA2APF3 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CtcflA2APF3 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CtcflA2APF3 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CtcflA2APF3 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
CtcflA2APF3 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CtcflA2APF3 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
CtcflA2APF3 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.31□□□□□ -0.12
CtcflA2APF3 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtcflA2APF3 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CtcflA2APF3 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtcflA2APF3 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CtcflA2APF3 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtcflA2APF3 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CtcflA2APF3 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtcflA2APF3 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtcflA2APF3 Gm17661-201ENSMUST00000170317 270 ntBASIC14.31□□□□□ -0.12
CtcflA2APF3 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtcflA2APF3 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.31□□□□□ -0.12
CtcflA2APF3 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtcflA2APF3 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtcflA2APF3 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CtcflA2APF3 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.31□□□□□ -0.12
CtcflA2APF3 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CtcflA2APF3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.31□□□□□ -0.12
CtcflA2APF3 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtcflA2APF3 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtcflA2APF3 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.31□□□□□ -0.12
CtcflA2APF3 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtcflA2APF3 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtcflA2APF3 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CtcflA2APF3 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CtcflA2APF3 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CtcflA2APF3 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtcflA2APF3 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CtcflA2APF3 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CtcflA2APF3 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.3□□□□□ -0.12
CtcflA2APF3 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CtcflA2APF3 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CtcflA2APF3 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CtcflA2APF3 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CtcflA2APF3 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CtcflA2APF3 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC14.3□□□□□ -0.12
CtcflA2APF3 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.3□□□□□ -0.12
CtcflA2APF3 Gm27000-201ENSMUST00000182943 842 ntBASIC14.3□□□□□ -0.12
CtcflA2APF3 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CtcflA2APF3 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CtcflA2APF3 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CtcflA2APF3 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.3□□□□□ -0.12
CtcflA2APF3 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CtcflA2APF3 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CtcflA2APF3 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CtcflA2APF3 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CtcflA2APF3 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CtcflA2APF3 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CtcflA2APF3 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CtcflA2APF3 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CtcflA2APF3 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms