Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ubr4A2AN08 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Ubr4A2AN08 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ubr4A2AN08 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ubr4A2AN08 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Ubr4A2AN08 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ubr4A2AN08 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ubr4A2AN08 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ubr4A2AN08 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC8.17□□□□□ -1.1
Ubr4A2AN08 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Ubr4A2AN08 Gm6244-201ENSMUST00000178732 841 ntBASIC8.17□□□□□ -1.1
Ubr4A2AN08 AC122024.2-201ENSMUST00000220086 871 ntBASIC8.17□□□□□ -1.1
Ubr4A2AN08 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ubr4A2AN08 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ubr4A2AN08 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ubr4A2AN08 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ubr4A2AN08 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Ubr4A2AN08 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ubr4A2AN08 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ubr4A2AN08 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Ubr4A2AN08 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC8.17□□□□□ -1.1
Ubr4A2AN08 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ubr4A2AN08 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Ubr4A2AN08 Gm27572-201ENSMUST00000183702 255 ntBASIC8.17□□□□□ -1.1
Ubr4A2AN08 Gm42997-202ENSMUST00000200321 985 ntBASIC8.17□□□□□ -1.1
Ubr4A2AN08 AC140293.1-201ENSMUST00000225626 1247 ntBASIC8.17□□□□□ -1.1
Ubr4A2AN08 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ubr4A2AN08 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC8.17□□□□□ -1.1
Ubr4A2AN08 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ubr4A2AN08 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ubr4A2AN08 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC8.16□□□□□ -1.1
Ubr4A2AN08 Gm7783-201ENSMUST00000204795 781 ntBASIC8.16□□□□□ -1.1
Ubr4A2AN08 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC8.16□□□□□ -1.1
Ubr4A2AN08 Gm3318-201ENSMUST00000217604 1183 ntBASIC8.16□□□□□ -1.1
Ubr4A2AN08 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Ubr4A2AN08 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Ubr4A2AN08 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Ubr4A2AN08 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ubr4A2AN08 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Ubr4A2AN08 Proscos-202ENSMUST00000178990 666 ntBASIC8.16□□□□□ -1.1
Ubr4A2AN08 Gm8565-201ENSMUST00000183259 1014 ntBASIC8.16□□□□□ -1.1
Ubr4A2AN08 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC8.16□□□□□ -1.1
Ubr4A2AN08 AC150560.1-201ENSMUST00000227731 1187 ntBASIC8.16□□□□□ -1.1
Ubr4A2AN08 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ubr4A2AN08 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ubr4A2AN08 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ubr4A2AN08 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ubr4A2AN08 Gm16499-203ENSMUST00000204633 2177 ntBASIC8.16□□□□□ -1.1
Ubr4A2AN08 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
Ubr4A2AN08 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ubr4A2AN08 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ubr4A2AN08 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Ubr4A2AN08 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Ubr4A2AN08 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Ubr4A2AN08 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ubr4A2AN08 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ubr4A2AN08 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Ubr4A2AN08 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Ubr4A2AN08 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ubr4A2AN08 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ubr4A2AN08 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC8.16□□□□□ -1.1
Ubr4A2AN08 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Ubr4A2AN08 Gm38158-201ENSMUST00000194617 339 ntBASIC8.16□□□□□ -1.1
Ubr4A2AN08 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC8.16□□□□□ -1.1
Ubr4A2AN08 Gm6013-201ENSMUST00000212264 699 ntBASIC8.16□□□□□ -1.1
Ubr4A2AN08 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ubr4A2AN08 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ubr4A2AN08 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC8.16□□□□□ -1.1
Ubr4A2AN08 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC8.16□□□□□ -1.1
Ubr4A2AN08 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Ubr4A2AN08 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ubr4A2AN08 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ubr4A2AN08 Iqck-206ENSMUST00000208658 2891 ntBASIC8.15□□□□□ -1.1
Ubr4A2AN08 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ubr4A2AN08 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC8.15□□□□□ -1.1
Ubr4A2AN08 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ubr4A2AN08 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ubr4A2AN08 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Ubr4A2AN08 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ubr4A2AN08 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ubr4A2AN08 Dmtn-210ENSMUST00000228824 2377 ntBASIC8.15□□□□□ -1.1
Ubr4A2AN08 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ubr4A2AN08 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ubr4A2AN08 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ubr4A2AN08 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
Ubr4A2AN08 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Ubr4A2AN08 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC8.15□□□□□ -1.1
Ubr4A2AN08 Gm15823-201ENSMUST00000064305 670 ntBASIC8.15□□□□□ -1.1
Ubr4A2AN08 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ubr4A2AN08 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ubr4A2AN08 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ubr4A2AN08 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC8.15□□□□□ -1.1
Ubr4A2AN08 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ubr4A2AN08 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Ubr4A2AN08 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Ubr4A2AN08 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.11
Ubr4A2AN08 Gm3436-201ENSMUST00000179930 840 ntBASIC8.15□□□□□ -1.11
Ubr4A2AN08 Mir6958-201ENSMUST00000184207 73 ntBASIC8.15□□□□□ -1.11
Ubr4A2AN08 Gm42779-201ENSMUST00000198807 406 ntBASIC8.15□□□□□ -1.11
Ubr4A2AN08 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms