Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-1A0N8R0 Gm27389-201ENSMUST00000183622 195 ntBASIC12.63□□□□□ -0.39
Trav12d-1A0N8R0 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav12d-1A0N8R0 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC12.63□□□□□ -0.39
Trav12d-1A0N8R0 Gm45058-201ENSMUST00000205810 766 ntBASIC12.63□□□□□ -0.39
Trav12d-1A0N8R0 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-1A0N8R0 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-1A0N8R0 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trav12d-1A0N8R0 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav12d-1A0N8R0 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-1A0N8R0 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.63□□□□□ -0.39
Trav12d-1A0N8R0 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-1A0N8R0 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-1A0N8R0 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-1A0N8R0 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-1A0N8R0 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-1A0N8R0 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-1A0N8R0 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-1A0N8R0 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-1A0N8R0 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12d-1A0N8R0 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12d-1A0N8R0 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12d-1A0N8R0 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12d-1A0N8R0 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12d-1A0N8R0 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav12d-1A0N8R0 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12d-1A0N8R0 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12d-1A0N8R0 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12d-1A0N8R0 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12d-1A0N8R0 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12d-1A0N8R0 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12d-1A0N8R0 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12d-1A0N8R0 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12d-1A0N8R0 Gm13559-201ENSMUST00000120476 863 ntBASIC12.62□□□□□ -0.39
Trav12d-1A0N8R0 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav12d-1A0N8R0 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav12d-1A0N8R0 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12d-1A0N8R0 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12d-1A0N8R0 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.62□□□□□ -0.39
Trav12d-1A0N8R0 AC114585.2-202ENSMUST00000228094 426 ntBASIC12.62□□□□□ -0.39
Trav12d-1A0N8R0 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12d-1A0N8R0 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12d-1A0N8R0 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav12d-1A0N8R0 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav12d-1A0N8R0 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12d-1A0N8R0 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12d-1A0N8R0 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12d-1A0N8R0 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12d-1A0N8R0 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.62□□□□□ -0.39
Trav12d-1A0N8R0 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.62□□□□□ -0.39
Trav12d-1A0N8R0 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12d-1A0N8R0 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12d-1A0N8R0 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12d-1A0N8R0 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Trav12d-1A0N8R0 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.61□□□□□ -0.39
Trav12d-1A0N8R0 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12d-1A0N8R0 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12d-1A0N8R0 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav12d-1A0N8R0 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12d-1A0N8R0 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12d-1A0N8R0 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12d-1A0N8R0 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12d-1A0N8R0 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12d-1A0N8R0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC12.61□□□□□ -0.39
Trav12d-1A0N8R0 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12d-1A0N8R0 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav12d-1A0N8R0 Gm37055-201ENSMUST00000191866 133 ntBASIC12.61□□□□□ -0.39
Trav12d-1A0N8R0 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12d-1A0N8R0 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav12d-1A0N8R0 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12d-1A0N8R0 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav12d-1A0N8R0 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12d-1A0N8R0 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12d-1A0N8R0 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12d-1A0N8R0 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12d-1A0N8R0 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12d-1A0N8R0 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Trav12d-1A0N8R0 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12d-1A0N8R0 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.6□□□□□ -0.39
Trav12d-1A0N8R0 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav12d-1A0N8R0 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12d-1A0N8R0 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12d-1A0N8R0 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12d-1A0N8R0 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav12d-1A0N8R0 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12d-1A0N8R0 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav12d-1A0N8R0 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trav12d-1A0N8R0 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12d-1A0N8R0 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12d-1A0N8R0 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Trav12d-1A0N8R0 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12d-1A0N8R0 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.6□□□□□ -0.39
Trav12d-1A0N8R0 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12d-1A0N8R0 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Trav12d-1A0N8R0 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12d-1A0N8R0 Gm15039-201ENSMUST00000118914 875 ntBASIC12.6□□□□□ -0.39
Trav12d-1A0N8R0 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12d-1A0N8R0 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12d-1A0N8R0 Gm29257-201ENSMUST00000186115 639 ntBASIC12.6□□□□□ -0.39
Trav12d-1A0N8R0 Gm9484-201ENSMUST00000195892 1159 ntBASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms