Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhgb8A0A140LI48 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Pcdhgb8A0A140LI48 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhgb8A0A140LI48 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Pcdhgb8A0A140LI48 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhgb8A0A140LI48 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhgb8A0A140LI48 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhgb8A0A140LI48 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhgb8A0A140LI48 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhgb8A0A140LI48 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhgb8A0A140LI48 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhgb8A0A140LI48 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Pcdhgb8A0A140LI48 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhgb8A0A140LI48 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhgb8A0A140LI48 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.14
Pcdhgb8A0A140LI48 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhgb8A0A140LI48 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhgb8A0A140LI48 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhgb8A0A140LI48 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Pcdhgb8A0A140LI48 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhgb8A0A140LI48 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhgb8A0A140LI48 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhgb8A0A140LI48 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhgb8A0A140LI48 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.2□□□□□ -0.14
Pcdhgb8A0A140LI48 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhgb8A0A140LI48 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhgb8A0A140LI48 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Pcdhgb8A0A140LI48 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhgb8A0A140LI48 Gm13186-201ENSMUST00000118031 316 ntBASIC14.2□□□□□ -0.14
Pcdhgb8A0A140LI48 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.2□□□□□ -0.14
Pcdhgb8A0A140LI48 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.2□□□□□ -0.14
Pcdhgb8A0A140LI48 Ank2-226ENSMUST00000189368 339 ntBASIC14.2□□□□□ -0.14
Pcdhgb8A0A140LI48 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhgb8A0A140LI48 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhgb8A0A140LI48 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhgb8A0A140LI48 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhgb8A0A140LI48 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhgb8A0A140LI48 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhgb8A0A140LI48 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhgb8A0A140LI48 Sybu-209ENSMUST00000228639 4113 ntBASIC14.2□□□□□ -0.14
Pcdhgb8A0A140LI48 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhgb8A0A140LI48 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdhgb8A0A140LI48 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhgb8A0A140LI48 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhgb8A0A140LI48 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdhgb8A0A140LI48 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.19□□□□□ -0.14
Pcdhgb8A0A140LI48 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhgb8A0A140LI48 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhgb8A0A140LI48 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhgb8A0A140LI48 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhgb8A0A140LI48 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhgb8A0A140LI48 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhgb8A0A140LI48 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhgb8A0A140LI48 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhgb8A0A140LI48 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhgb8A0A140LI48 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.19□□□□□ -0.14
Pcdhgb8A0A140LI48 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhgb8A0A140LI48 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhgb8A0A140LI48 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhgb8A0A140LI48 Gm6623-201ENSMUST00000173570 544 ntBASIC14.19□□□□□ -0.14
Pcdhgb8A0A140LI48 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Pcdhgb8A0A140LI48 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.19□□□□□ -0.14
Pcdhgb8A0A140LI48 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.19□□□□□ -0.14
Pcdhgb8A0A140LI48 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhgb8A0A140LI48 Gm18115-201ENSMUST00000221209 621 ntBASIC14.19□□□□□ -0.14
Pcdhgb8A0A140LI48 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.19□□□□□ -0.14
Pcdhgb8A0A140LI48 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Pcdhgb8A0A140LI48 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhgb8A0A140LI48 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Pcdhgb8A0A140LI48 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhgb8A0A140LI48 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhgb8A0A140LI48 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhgb8A0A140LI48 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhgb8A0A140LI48 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.19□□□□□ -0.14
Pcdhgb8A0A140LI48 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhgb8A0A140LI48 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdhgb8A0A140LI48 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhgb8A0A140LI48 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Pcdhgb8A0A140LI48 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhgb8A0A140LI48 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.18□□□□□ -0.14
Pcdhgb8A0A140LI48 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhgb8A0A140LI48 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhgb8A0A140LI48 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhgb8A0A140LI48 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Pcdhgb8A0A140LI48 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhgb8A0A140LI48 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhgb8A0A140LI48 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhgb8A0A140LI48 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhgb8A0A140LI48 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhgb8A0A140LI48 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhgb8A0A140LI48 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhgb8A0A140LI48 Gm9103-201ENSMUST00000119371 405 ntBASIC14.18□□□□□ -0.14
Pcdhgb8A0A140LI48 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.18□□□□□ -0.14
Pcdhgb8A0A140LI48 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdhgb8A0A140LI48 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhgb8A0A140LI48 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhgb8A0A140LI48 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhgb8A0A140LI48 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhgb8A0A140LI48 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhgb8A0A140LI48 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms