Protein–RNA interactions for Protein: A0A0N4SVP8

Gm5580, Predicted pseudogene 5580, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5580A0A0N4SVP8 Gm6257-201ENSMUST00000163864 910 ntBASIC17.12■□□□□ 0.33
Gm5580A0A0N4SVP8 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5580A0A0N4SVP8 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5580A0A0N4SVP8 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5580A0A0N4SVP8 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5580A0A0N4SVP8 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5580A0A0N4SVP8 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5580A0A0N4SVP8 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5580A0A0N4SVP8 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.12■□□□□ 0.33
Gm5580A0A0N4SVP8 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5580A0A0N4SVP8 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5580A0A0N4SVP8 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5580A0A0N4SVP8 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5580A0A0N4SVP8 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5580A0A0N4SVP8 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Gm5580A0A0N4SVP8 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Gm5580A0A0N4SVP8 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5580A0A0N4SVP8 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.11■□□□□ 0.33
Gm5580A0A0N4SVP8 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.11■□□□□ 0.33
Gm5580A0A0N4SVP8 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Gm5580A0A0N4SVP8 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.11■□□□□ 0.33
Gm5580A0A0N4SVP8 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.11■□□□□ 0.33
Gm5580A0A0N4SVP8 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5580A0A0N4SVP8 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5580A0A0N4SVP8 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5580A0A0N4SVP8 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
Gm5580A0A0N4SVP8 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5580A0A0N4SVP8 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Gm5580A0A0N4SVP8 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5580A0A0N4SVP8 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5580A0A0N4SVP8 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5580A0A0N4SVP8 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Gm5580A0A0N4SVP8 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5580A0A0N4SVP8 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5580A0A0N4SVP8 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5580A0A0N4SVP8 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5580A0A0N4SVP8 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.1■□□□□ 0.33
Gm5580A0A0N4SVP8 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Gm5580A0A0N4SVP8 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5580A0A0N4SVP8 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Gm5580A0A0N4SVP8 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5580A0A0N4SVP8 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5580A0A0N4SVP8 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.1■□□□□ 0.33
Gm5580A0A0N4SVP8 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5580A0A0N4SVP8 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Gm5580A0A0N4SVP8 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5580A0A0N4SVP8 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5580A0A0N4SVP8 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Gm5580A0A0N4SVP8 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.1■□□□□ 0.33
Gm5580A0A0N4SVP8 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5580A0A0N4SVP8 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Gm5580A0A0N4SVP8 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5580A0A0N4SVP8 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5580A0A0N4SVP8 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5580A0A0N4SVP8 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5580A0A0N4SVP8 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5580A0A0N4SVP8 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Gm5580A0A0N4SVP8 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5580A0A0N4SVP8 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5580A0A0N4SVP8 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5580A0A0N4SVP8 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5580A0A0N4SVP8 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5580A0A0N4SVP8 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5580A0A0N4SVP8 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.09■□□□□ 0.33
Gm5580A0A0N4SVP8 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5580A0A0N4SVP8 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5580A0A0N4SVP8 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5580A0A0N4SVP8 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5580A0A0N4SVP8 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5580A0A0N4SVP8 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5580A0A0N4SVP8 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5580A0A0N4SVP8 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.09■□□□□ 0.33
Gm5580A0A0N4SVP8 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5580A0A0N4SVP8 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5580A0A0N4SVP8 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Gm5580A0A0N4SVP8 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Gm5580A0A0N4SVP8 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm5580A0A0N4SVP8 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Gm5580A0A0N4SVP8 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm5580A0A0N4SVP8 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Gm5580A0A0N4SVP8 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.08■□□□□ 0.32
Gm5580A0A0N4SVP8 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm5580A0A0N4SVP8 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gm5580A0A0N4SVP8 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.08■□□□□ 0.32
Gm5580A0A0N4SVP8 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Gm5580A0A0N4SVP8 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gm5580A0A0N4SVP8 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gm5580A0A0N4SVP8 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Gm5580A0A0N4SVP8 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Gm5580A0A0N4SVP8 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm5580A0A0N4SVP8 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm5580A0A0N4SVP8 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Gm5580A0A0N4SVP8 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm5580A0A0N4SVP8 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm5580A0A0N4SVP8 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm5580A0A0N4SVP8 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm5580A0A0N4SVP8 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm5580A0A0N4SVP8 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm5580A0A0N4SVP8 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gm5580A0A0N4SVP8 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms