Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3n-3A0A0G2JEM0 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Gm12134-201ENSMUST00000122109 520 ntBASIC11.9□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC11.9□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Gm18958-201ENSMUST00000174258 762 ntBASIC11.9□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC11.9□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Gm44878-201ENSMUST00000205812 1295 ntBASIC11.9□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC11.9□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3n-3A0A0G2JEM0 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.9□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC11.9□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3n-3A0A0G2JEM0 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11.89□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trav3n-3A0A0G2JEM0 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3n-3A0A0G2JEM0 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Gm7638-201ENSMUST00000121348 967 ntBASIC11.89□□□□□ -0.51
Trav3n-3A0A0G2JEM0 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Gm38027-201ENSMUST00000192315 235 ntBASIC11.89□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Gm5297-201ENSMUST00000198555 1171 ntBASIC11.89□□□□□ -0.51
Trav3n-3A0A0G2JEM0 AC135637.1-201ENSMUST00000227750 365 ntBASIC11.89□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Gm44729-201ENSMUST00000206759 2052 ntBASIC11.89□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.89□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3n-3A0A0G2JEM0 App-207ENSMUST00000227737 2827 ntBASIC11.89□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC11.88□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3n-3A0A0G2JEM0 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.88□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms