Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav9n-2A0A0G2JDP3 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav9n-2A0A0G2JDP3 AC130713.1-201ENSMUST00000228853 1096 ntBASIC11.43□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav9n-2A0A0G2JDP3 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9n-2A0A0G2JDP3 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC11.42□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Gm38327-201ENSMUST00000195852 1755 ntBASIC11.42□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Gm7284-201ENSMUST00000131667 944 ntBASIC11.42□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Gm7507-201ENSMUST00000183053 1008 ntBASIC11.42□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC11.42□□□□□ -0.58
Trav9n-2A0A0G2JDP3 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9n-2A0A0G2JDP3 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC11.42□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9n-2A0A0G2JDP3 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Olfr129-201ENSMUST00000122318 993 ntBASIC11.41□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Gm27742-201ENSMUST00000184667 60 ntBASIC11.41□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Gm27704-201ENSMUST00000185094 107 ntBASIC11.41□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC11.41□□□□□ -0.58
Trav9n-2A0A0G2JDP3 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC11.41□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Gm16011-201ENSMUST00000121567 2662 ntBASIC11.41□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9n-2A0A0G2JDP3 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9n-2A0A0G2JDP3 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms