Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-4A0A075B6B4 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.09□□□□□ -0.47
Trav6-4A0A075B6B4 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Trav6-4A0A075B6B4 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-4A0A075B6B4 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-4A0A075B6B4 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-4A0A075B6B4 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-4A0A075B6B4 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-4A0A075B6B4 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-4A0A075B6B4 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.08□□□□□ -0.48
Trav6-4A0A075B6B4 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-4A0A075B6B4 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-4A0A075B6B4 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-4A0A075B6B4 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav6-4A0A075B6B4 Gm12497-201ENSMUST00000138778 237 ntBASIC12.08□□□□□ -0.48
Trav6-4A0A075B6B4 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-4A0A075B6B4 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.08□□□□□ -0.48
Trav6-4A0A075B6B4 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Trav6-4A0A075B6B4 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.08□□□□□ -0.48
Trav6-4A0A075B6B4 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-4A0A075B6B4 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-4A0A075B6B4 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-4A0A075B6B4 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-4A0A075B6B4 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-4A0A075B6B4 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trav6-4A0A075B6B4 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-4A0A075B6B4 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-4A0A075B6B4 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-4A0A075B6B4 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav6-4A0A075B6B4 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav6-4A0A075B6B4 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-4A0A075B6B4 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-4A0A075B6B4 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-4A0A075B6B4 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-4A0A075B6B4 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav6-4A0A075B6B4 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-4A0A075B6B4 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-4A0A075B6B4 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-4A0A075B6B4 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-4A0A075B6B4 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-4A0A075B6B4 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav6-4A0A075B6B4 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-4A0A075B6B4 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav6-4A0A075B6B4 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.07□□□□□ -0.48
Trav6-4A0A075B6B4 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-4A0A075B6B4 AC069562.2-201ENSMUST00000224644 2146 ntBASIC12.07□□□□□ -0.48
Trav6-4A0A075B6B4 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-4A0A075B6B4 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Trav6-4A0A075B6B4 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Trav6-4A0A075B6B4 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Trav6-4A0A075B6B4 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav6-4A0A075B6B4 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.07□□□□□ -0.48
Trav6-4A0A075B6B4 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.07□□□□□ -0.48
Trav6-4A0A075B6B4 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-4A0A075B6B4 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.07□□□□□ -0.48
Trav6-4A0A075B6B4 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Trav6-4A0A075B6B4 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav6-4A0A075B6B4 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-4A0A075B6B4 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-4A0A075B6B4 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-4A0A075B6B4 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-4A0A075B6B4 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-4A0A075B6B4 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-4A0A075B6B4 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-4A0A075B6B4 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-4A0A075B6B4 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Trav6-4A0A075B6B4 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-4A0A075B6B4 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-4A0A075B6B4 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-4A0A075B6B4 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-4A0A075B6B4 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-4A0A075B6B4 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-4A0A075B6B4 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-4A0A075B6B4 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-4A0A075B6B4 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-4A0A075B6B4 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-4A0A075B6B4 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav6-4A0A075B6B4 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-4A0A075B6B4 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-4A0A075B6B4 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-4A0A075B6B4 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Trav6-4A0A075B6B4 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-4A0A075B6B4 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-4A0A075B6B4 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-4A0A075B6B4 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-4A0A075B6B4 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-4A0A075B6B4 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Trav6-4A0A075B6B4 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-4A0A075B6B4 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.06□□□□□ -0.48
Trav6-4A0A075B6B4 Gm4459-201ENSMUST00000118750 468 ntBASIC12.06□□□□□ -0.48
Trav6-4A0A075B6B4 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-4A0A075B6B4 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.06□□□□□ -0.48
Trav6-4A0A075B6B4 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-4A0A075B6B4 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC12.06□□□□□ -0.48
Trav6-4A0A075B6B4 Gm7506-201ENSMUST00000207758 815 ntBASIC12.06□□□□□ -0.48
Trav6-4A0A075B6B4 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-4A0A075B6B4 Gm8655-201ENSMUST00000221159 852 ntBASIC12.06□□□□□ -0.48
Trav6-4A0A075B6B4 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-4A0A075B6B4 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-4A0A075B6B4 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms