Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav18A0A075B656 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav18A0A075B656 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav18A0A075B656 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav18A0A075B656 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav18A0A075B656 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav18A0A075B656 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav18A0A075B656 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav18A0A075B656 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav18A0A075B656 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav18A0A075B656 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav18A0A075B656 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav18A0A075B656 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav18A0A075B656 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav18A0A075B656 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Trav18A0A075B656 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav18A0A075B656 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav18A0A075B656 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav18A0A075B656 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav18A0A075B656 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trav18A0A075B656 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav18A0A075B656 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav18A0A075B656 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav18A0A075B656 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav18A0A075B656 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.87□□□□□ -0.35
Trav18A0A075B656 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav18A0A075B656 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav18A0A075B656 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav18A0A075B656 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.87□□□□□ -0.35
Trav18A0A075B656 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Trav18A0A075B656 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav18A0A075B656 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav18A0A075B656 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav18A0A075B656 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav18A0A075B656 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav18A0A075B656 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Trav18A0A075B656 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav18A0A075B656 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav18A0A075B656 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav18A0A075B656 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav18A0A075B656 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav18A0A075B656 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav18A0A075B656 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav18A0A075B656 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav18A0A075B656 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav18A0A075B656 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Trav18A0A075B656 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav18A0A075B656 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav18A0A075B656 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
Trav18A0A075B656 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav18A0A075B656 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav18A0A075B656 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav18A0A075B656 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav18A0A075B656 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav18A0A075B656 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav18A0A075B656 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Trav18A0A075B656 Mir6404-201ENSMUST00000183699 94 ntBASIC12.86□□□□□ -0.35
Trav18A0A075B656 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC12.86□□□□□ -0.35
Trav18A0A075B656 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav18A0A075B656 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.86□□□□□ -0.35
Trav18A0A075B656 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.86□□□□□ -0.35
Trav18A0A075B656 AC114585.2-202ENSMUST00000228094 426 ntBASIC12.86□□□□□ -0.35
Trav18A0A075B656 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trav18A0A075B656 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav18A0A075B656 Gm9987-201ENSMUST00000069768 567 ntBASIC12.86□□□□□ -0.35
Trav18A0A075B656 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav18A0A075B656 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav18A0A075B656 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav18A0A075B656 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav18A0A075B656 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav18A0A075B656 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav18A0A075B656 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Trav18A0A075B656 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav18A0A075B656 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav18A0A075B656 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav18A0A075B656 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav18A0A075B656 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav18A0A075B656 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav18A0A075B656 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Trav18A0A075B656 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav18A0A075B656 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav18A0A075B656 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav18A0A075B656 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav18A0A075B656 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav18A0A075B656 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav18A0A075B656 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav18A0A075B656 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav18A0A075B656 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav18A0A075B656 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav18A0A075B656 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.85□□□□□ -0.35
Trav18A0A075B656 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav18A0A075B656 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav18A0A075B656 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav18A0A075B656 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav18A0A075B656 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav18A0A075B656 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav18A0A075B656 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav18A0A075B656 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav18A0A075B656 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav18A0A075B656 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms