Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16A0A075B653 Gm16042-201ENSMUST00000204813 1247 ntBASIC12.15□□□□□ -0.46
Trav16A0A075B653 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC12.15□□□□□ -0.46
Trav16A0A075B653 AC135637.1-201ENSMUST00000227750 365 ntBASIC12.15□□□□□ -0.46
Trav16A0A075B653 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16A0A075B653 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16A0A075B653 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16A0A075B653 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16A0A075B653 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16A0A075B653 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16A0A075B653 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16A0A075B653 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16A0A075B653 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16A0A075B653 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16A0A075B653 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16A0A075B653 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav16A0A075B653 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.15□□□□□ -0.46
Trav16A0A075B653 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav16A0A075B653 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Trav16A0A075B653 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.15□□□□□ -0.47
Trav16A0A075B653 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Trav16A0A075B653 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16A0A075B653 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16A0A075B653 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16A0A075B653 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16A0A075B653 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16A0A075B653 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav16A0A075B653 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16A0A075B653 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16A0A075B653 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16A0A075B653 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16A0A075B653 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav16A0A075B653 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16A0A075B653 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16A0A075B653 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav16A0A075B653 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16A0A075B653 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16A0A075B653 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16A0A075B653 Gm44450-201ENSMUST00000199528 114 ntBASIC12.14□□□□□ -0.47
Trav16A0A075B653 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav16A0A075B653 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16A0A075B653 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16A0A075B653 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16A0A075B653 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16A0A075B653 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Trav16A0A075B653 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16A0A075B653 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16A0A075B653 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16A0A075B653 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16A0A075B653 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16A0A075B653 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16A0A075B653 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16A0A075B653 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Trav16A0A075B653 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16A0A075B653 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16A0A075B653 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16A0A075B653 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16A0A075B653 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav16A0A075B653 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav16A0A075B653 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16A0A075B653 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16A0A075B653 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav16A0A075B653 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav16A0A075B653 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav16A0A075B653 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav16A0A075B653 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav16A0A075B653 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav16A0A075B653 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.13□□□□□ -0.47
Trav16A0A075B653 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav16A0A075B653 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav16A0A075B653 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav16A0A075B653 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav16A0A075B653 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav16A0A075B653 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav16A0A075B653 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav16A0A075B653 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav16A0A075B653 Mir1199-201ENSMUST00000117015 119 ntBASIC12.13□□□□□ -0.47
Trav16A0A075B653 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC12.13□□□□□ -0.47
Trav16A0A075B653 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC12.13□□□□□ -0.47
Trav16A0A075B653 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav16A0A075B653 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav16A0A075B653 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav16A0A075B653 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC12.13□□□□□ -0.47
Trav16A0A075B653 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC12.13□□□□□ -0.47
Trav16A0A075B653 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav16A0A075B653 AC164629.5-201ENSMUST00000220387 632 ntBASIC12.13□□□□□ -0.47
Trav16A0A075B653 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav16A0A075B653 AC156016.1-201ENSMUST00000227190 1035 ntBASIC12.13□□□□□ -0.47
Trav16A0A075B653 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav16A0A075B653 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav16A0A075B653 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav16A0A075B653 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav16A0A075B653 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav16A0A075B653 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav16A0A075B653 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav16A0A075B653 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav16A0A075B653 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav16A0A075B653 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav16A0A075B653 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav16A0A075B653 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms