Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trav4-4-dv10A0A075B651 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav4-4-dv10A0A075B651 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav4-4-dv10A0A075B651 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav4-4-dv10A0A075B651 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav4-4-dv10A0A075B651 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav4-4-dv10A0A075B651 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav4-4-dv10A0A075B651 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav4-4-dv10A0A075B651 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav4-4-dv10A0A075B651 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Trav4-4-dv10A0A075B651 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav4-4-dv10A0A075B651 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav4-4-dv10A0A075B651 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav4-4-dv10A0A075B651 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4-4-dv10A0A075B651 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Trav4-4-dv10A0A075B651 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav4-4-dv10A0A075B651 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4-4-dv10A0A075B651 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4-4-dv10A0A075B651 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav4-4-dv10A0A075B651 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4-4-dv10A0A075B651 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Trav4-4-dv10A0A075B651 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4-4-dv10A0A075B651 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4-4-dv10A0A075B651 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC12.22□□□□□ -0.45
Trav4-4-dv10A0A075B651 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4-4-dv10A0A075B651 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4-4-dv10A0A075B651 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Trav4-4-dv10A0A075B651 Gm27011-201ENSMUST00000182352 972 ntBASIC12.22□□□□□ -0.45
Trav4-4-dv10A0A075B651 Gm45058-201ENSMUST00000205810 766 ntBASIC12.22□□□□□ -0.45
Trav4-4-dv10A0A075B651 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4-4-dv10A0A075B651 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Trav4-4-dv10A0A075B651 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4-4-dv10A0A075B651 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4-4-dv10A0A075B651 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav4-4-dv10A0A075B651 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav4-4-dv10A0A075B651 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav4-4-dv10A0A075B651 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4-4-dv10A0A075B651 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
Trav4-4-dv10A0A075B651 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4-4-dv10A0A075B651 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav4-4-dv10A0A075B651 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav4-4-dv10A0A075B651 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4-4-dv10A0A075B651 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4-4-dv10A0A075B651 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4-4-dv10A0A075B651 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4-4-dv10A0A075B651 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4-4-dv10A0A075B651 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4-4-dv10A0A075B651 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4-4-dv10A0A075B651 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4-4-dv10A0A075B651 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4-4-dv10A0A075B651 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4-4-dv10A0A075B651 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav4-4-dv10A0A075B651 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav4-4-dv10A0A075B651 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.21□□□□□ -0.45
Trav4-4-dv10A0A075B651 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav4-4-dv10A0A075B651 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.21□□□□□ -0.45
Trav4-4-dv10A0A075B651 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav4-4-dv10A0A075B651 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trav4-4-dv10A0A075B651 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav4-4-dv10A0A075B651 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav4-4-dv10A0A075B651 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav4-4-dv10A0A075B651 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav4-4-dv10A0A075B651 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav4-4-dv10A0A075B651 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav4-4-dv10A0A075B651 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trav4-4-dv10A0A075B651 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trav4-4-dv10A0A075B651 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav4-4-dv10A0A075B651 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav4-4-dv10A0A075B651 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.21□□□□□ -0.45
Trav4-4-dv10A0A075B651 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav4-4-dv10A0A075B651 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav4-4-dv10A0A075B651 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav4-4-dv10A0A075B651 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.21□□□□□ -0.46
Trav4-4-dv10A0A075B651 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav4-4-dv10A0A075B651 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav4-4-dv10A0A075B651 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav4-4-dv10A0A075B651 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Trav4-4-dv10A0A075B651 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.21□□□□□ -0.46
Trav4-4-dv10A0A075B651 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav4-4-dv10A0A075B651 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav4-4-dv10A0A075B651 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav4-4-dv10A0A075B651 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav4-4-dv10A0A075B651 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav4-4-dv10A0A075B651 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav4-4-dv10A0A075B651 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav4-4-dv10A0A075B651 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Trav4-4-dv10A0A075B651 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav4-4-dv10A0A075B651 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav4-4-dv10A0A075B651 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav4-4-dv10A0A075B651 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav4-4-dv10A0A075B651 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav4-4-dv10A0A075B651 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav4-4-dv10A0A075B651 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav4-4-dv10A0A075B651 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trav4-4-dv10A0A075B651 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav4-4-dv10A0A075B651 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav4-4-dv10A0A075B651 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav4-4-dv10A0A075B651 Gm13559-201ENSMUST00000120476 863 ntBASIC12.2□□□□□ -0.46
Trav4-4-dv10A0A075B651 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav4-4-dv10A0A075B651 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms