Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.84□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.84□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC12.84□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.84□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC12.84□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav15-2-dv6-2A0A075B650 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.83□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.83□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Gm30025-201ENSMUST00000218555 728 ntBASIC12.83□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.82□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.82□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.82□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms