Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC11.57□□□□□ -0.56
Trav16d-dv11A0A075B617 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16d-dv11A0A075B617 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trav16d-dv11A0A075B617 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16d-dv11A0A075B617 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16d-dv11A0A075B617 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16d-dv11A0A075B617 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16d-dv11A0A075B617 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16d-dv11A0A075B617 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16d-dv11A0A075B617 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16d-dv11A0A075B617 Phf7-203ENSMUST00000226565 1971 ntBASIC11.57□□□□□ -0.56
Trav16d-dv11A0A075B617 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16d-dv11A0A075B617 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav16d-dv11A0A075B617 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16d-dv11A0A075B617 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16d-dv11A0A075B617 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trav16d-dv11A0A075B617 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trav16d-dv11A0A075B617 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16d-dv11A0A075B617 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16d-dv11A0A075B617 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav16d-dv11A0A075B617 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Trav16d-dv11A0A075B617 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav16d-dv11A0A075B617 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav16d-dv11A0A075B617 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav16d-dv11A0A075B617 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav16d-dv11A0A075B617 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav16d-dv11A0A075B617 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav16d-dv11A0A075B617 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav16d-dv11A0A075B617 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav16d-dv11A0A075B617 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC11.56□□□□□ -0.56
Trav16d-dv11A0A075B617 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav16d-dv11A0A075B617 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC11.56□□□□□ -0.56
Trav16d-dv11A0A075B617 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trav16d-dv11A0A075B617 Gm43183-201ENSMUST00000200632 547 ntBASIC11.56□□□□□ -0.56
Trav16d-dv11A0A075B617 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav16d-dv11A0A075B617 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC11.56□□□□□ -0.56
Trav16d-dv11A0A075B617 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trav16d-dv11A0A075B617 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trav16d-dv11A0A075B617 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav16d-dv11A0A075B617 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC11.56□□□□□ -0.56
Trav16d-dv11A0A075B617 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav16d-dv11A0A075B617 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav16d-dv11A0A075B617 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav16d-dv11A0A075B617 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav16d-dv11A0A075B617 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav16d-dv11A0A075B617 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Trav16d-dv11A0A075B617 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16d-dv11A0A075B617 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trav16d-dv11A0A075B617 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16d-dv11A0A075B617 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav16d-dv11A0A075B617 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16d-dv11A0A075B617 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16d-dv11A0A075B617 AC124581.1-201ENSMUST00000225416 1399 ntBASIC11.55□□□□□ -0.56
Trav16d-dv11A0A075B617 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16d-dv11A0A075B617 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16d-dv11A0A075B617 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16d-dv11A0A075B617 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trav16d-dv11A0A075B617 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16d-dv11A0A075B617 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16d-dv11A0A075B617 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16d-dv11A0A075B617 Slc35b2-202ENSMUST00000223987 1766 ntBASIC11.55□□□□□ -0.56
Trav16d-dv11A0A075B617 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16d-dv11A0A075B617 Gm10849-201ENSMUST00000100397 618 ntBASIC11.55□□□□□ -0.56
Trav16d-dv11A0A075B617 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav16d-dv11A0A075B617 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16d-dv11A0A075B617 Gm36967-201ENSMUST00000193814 266 ntBASIC11.55□□□□□ -0.56
Trav16d-dv11A0A075B617 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trav16d-dv11A0A075B617 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trav16d-dv11A0A075B617 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16d-dv11A0A075B617 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16d-dv11A0A075B617 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16d-dv11A0A075B617 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16d-dv11A0A075B617 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16d-dv11A0A075B617 Gm11960-202ENSMUST00000181063 2858 ntBASIC11.55□□□□□ -0.56
Trav16d-dv11A0A075B617 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16d-dv11A0A075B617 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16d-dv11A0A075B617 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16d-dv11A0A075B617 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16d-dv11A0A075B617 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trav16d-dv11A0A075B617 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16d-dv11A0A075B617 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16d-dv11A0A075B617 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16d-dv11A0A075B617 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16d-dv11A0A075B617 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav16d-dv11A0A075B617 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav16d-dv11A0A075B617 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav16d-dv11A0A075B617 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav16d-dv11A0A075B617 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav16d-dv11A0A075B617 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav16d-dv11A0A075B617 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav16d-dv11A0A075B617 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav16d-dv11A0A075B617 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav16d-dv11A0A075B617 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav16d-dv11A0A075B617 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav16d-dv11A0A075B617 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav16d-dv11A0A075B617 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav16d-dv11A0A075B617 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav16d-dv11A0A075B617 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav16d-dv11A0A075B617 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav16d-dv11A0A075B617 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms