Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4n-4A0A075B615 AC159649.2-201ENSMUST00000222984 3223 ntBASIC10.91□□□□□ -0.66
Trav4n-4A0A075B615 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4n-4A0A075B615 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4n-4A0A075B615 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4n-4A0A075B615 Gm32996-201ENSMUST00000199828 1447 ntBASIC10.91□□□□□ -0.66
Trav4n-4A0A075B615 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4n-4A0A075B615 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC10.91□□□□□ -0.66
Trav4n-4A0A075B615 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Trav4n-4A0A075B615 Ksr1-207ENSMUST00000226282 5260 ntBASIC10.91□□□□□ -0.66
Trav4n-4A0A075B615 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4n-4A0A075B615 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4n-4A0A075B615 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4n-4A0A075B615 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav4n-4A0A075B615 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav4n-4A0A075B615 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav4n-4A0A075B615 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav4n-4A0A075B615 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Trav4n-4A0A075B615 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav4n-4A0A075B615 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC10.9□□□□□ -0.66
Trav4n-4A0A075B615 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav4n-4A0A075B615 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC10.9□□□□□ -0.66
Trav4n-4A0A075B615 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Trav4n-4A0A075B615 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav4n-4A0A075B615 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Trav4n-4A0A075B615 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav4n-4A0A075B615 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav4n-4A0A075B615 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav4n-4A0A075B615 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Trav4n-4A0A075B615 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav4n-4A0A075B615 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav4n-4A0A075B615 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC10.9□□□□□ -0.66
Trav4n-4A0A075B615 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC10.9□□□□□ -0.66
Trav4n-4A0A075B615 Gm45560-201ENSMUST00000211492 1472 ntBASIC10.9□□□□□ -0.66
Trav4n-4A0A075B615 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav4n-4A0A075B615 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Trav4n-4A0A075B615 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC10.9□□□□□ -0.66
Trav4n-4A0A075B615 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav4n-4A0A075B615 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC10.9□□□□□ -0.66
Trav4n-4A0A075B615 Gm13241-201ENSMUST00000094493 780 ntBASIC10.9□□□□□ -0.66
Trav4n-4A0A075B615 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Trav4n-4A0A075B615 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav4n-4A0A075B615 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav4n-4A0A075B615 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav4n-4A0A075B615 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC10.9□□□□□ -0.66
Trav4n-4A0A075B615 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav4n-4A0A075B615 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Trav4n-4A0A075B615 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav4n-4A0A075B615 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav4n-4A0A075B615 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav4n-4A0A075B615 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Trav4n-4A0A075B615 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Trav4n-4A0A075B615 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav4n-4A0A075B615 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.67
Trav4n-4A0A075B615 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav4n-4A0A075B615 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4n-4A0A075B615 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4n-4A0A075B615 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4n-4A0A075B615 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4n-4A0A075B615 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4n-4A0A075B615 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4n-4A0A075B615 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trav4n-4A0A075B615 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4n-4A0A075B615 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4n-4A0A075B615 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC10.89□□□□□ -0.67
Trav4n-4A0A075B615 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4n-4A0A075B615 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC10.89□□□□□ -0.67
Trav4n-4A0A075B615 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC10.89□□□□□ -0.67
Trav4n-4A0A075B615 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4n-4A0A075B615 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4n-4A0A075B615 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4n-4A0A075B615 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4n-4A0A075B615 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4n-4A0A075B615 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4n-4A0A075B615 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4n-4A0A075B615 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4n-4A0A075B615 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4n-4A0A075B615 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4n-4A0A075B615 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4n-4A0A075B615 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4n-4A0A075B615 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4n-4A0A075B615 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav4n-4A0A075B615 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Trav4n-4A0A075B615 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav4n-4A0A075B615 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav4n-4A0A075B615 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav4n-4A0A075B615 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav4n-4A0A075B615 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav4n-4A0A075B615 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Trav4n-4A0A075B615 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav4n-4A0A075B615 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav4n-4A0A075B615 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav4n-4A0A075B615 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav4n-4A0A075B615 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav4n-4A0A075B615 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav4n-4A0A075B615 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav4n-4A0A075B615 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav4n-4A0A075B615 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav4n-4A0A075B615 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav4n-4A0A075B615 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms