Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.72■□□□□ 0.11
H2afb2S4R1M3 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb2S4R1M3 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb2S4R1M3 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
H2afb2S4R1M3 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.72■□□□□ 0.11
H2afb2S4R1M3 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb2S4R1M3 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
H2afb2S4R1M3 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
H2afb2S4R1M3 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.72■□□□□ 0.11
H2afb2S4R1M3 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb2S4R1M3 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb2S4R1M3 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.72■□□□□ 0.11
H2afb2S4R1M3 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb2S4R1M3 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb2S4R1M3 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb2S4R1M3 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb2S4R1M3 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
H2afb2S4R1M3 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb2S4R1M3 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb2S4R1M3 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
H2afb2S4R1M3 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.72■□□□□ 0.11
H2afb2S4R1M3 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.72■□□□□ 0.11
H2afb2S4R1M3 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
H2afb2S4R1M3 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
H2afb2S4R1M3 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
H2afb2S4R1M3 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
H2afb2S4R1M3 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
H2afb2S4R1M3 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
H2afb2S4R1M3 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
H2afb2S4R1M3 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
H2afb2S4R1M3 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
H2afb2S4R1M3 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
H2afb2S4R1M3 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
H2afb2S4R1M3 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
H2afb2S4R1M3 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
H2afb2S4R1M3 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
H2afb2S4R1M3 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
H2afb2S4R1M3 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
H2afb2S4R1M3 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.71■□□□□ 0.11
H2afb2S4R1M3 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.71■□□□□ 0.11
H2afb2S4R1M3 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.71■□□□□ 0.11
H2afb2S4R1M3 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
H2afb2S4R1M3 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
H2afb2S4R1M3 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
H2afb2S4R1M3 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
H2afb2S4R1M3 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.71■□□□□ 0.11
H2afb2S4R1M3 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
H2afb2S4R1M3 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
H2afb2S4R1M3 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
H2afb2S4R1M3 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
H2afb2S4R1M3 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
H2afb2S4R1M3 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
H2afb2S4R1M3 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.71■□□□□ 0.1
H2afb2S4R1M3 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.7■□□□□ 0.1
H2afb2S4R1M3 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb2S4R1M3 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.7■□□□□ 0.1
H2afb2S4R1M3 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb2S4R1M3 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb2S4R1M3 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
H2afb2S4R1M3 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb2S4R1M3 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
H2afb2S4R1M3 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
H2afb2S4R1M3 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb2S4R1M3 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb2S4R1M3 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
H2afb2S4R1M3 Gm15372-201ENSMUST00000120729 834 ntBASIC15.7■□□□□ 0.1
H2afb2S4R1M3 Gm25745-201ENSMUST00000174945 133 ntBASIC15.7■□□□□ 0.1
H2afb2S4R1M3 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.7■□□□□ 0.1
H2afb2S4R1M3 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb2S4R1M3 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb2S4R1M3 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb2S4R1M3 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb2S4R1M3 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb2S4R1M3 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
H2afb2S4R1M3 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb2S4R1M3 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb2S4R1M3 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb2S4R1M3 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb2S4R1M3 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb2S4R1M3 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb2S4R1M3 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
H2afb2S4R1M3 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
H2afb2S4R1M3 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
H2afb2S4R1M3 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
H2afb2S4R1M3 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
H2afb2S4R1M3 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
H2afb2S4R1M3 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
H2afb2S4R1M3 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.69■□□□□ 0.1
H2afb2S4R1M3 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.69■□□□□ 0.1
H2afb2S4R1M3 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
H2afb2S4R1M3 Gm27867-201ENSMUST00000184778 125 ntBASIC15.69■□□□□ 0.1
H2afb2S4R1M3 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
H2afb2S4R1M3 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.69■□□□□ 0.1
H2afb2S4R1M3 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
H2afb2S4R1M3 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
H2afb2S4R1M3 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
H2afb2S4R1M3 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
H2afb2S4R1M3 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
H2afb2S4R1M3 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
H2afb2S4R1M3 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms