Protein–RNA interactions for Protein: Q9Z1P4

Lgr5, Leucine-rich repeat-containing G-protein coupled receptor 5, mousemouse

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lgr5Q9Z1P4 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lgr5Q9Z1P4 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lgr5Q9Z1P4 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lgr5Q9Z1P4 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lgr5Q9Z1P4 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lgr5Q9Z1P4 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lgr5Q9Z1P4 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lgr5Q9Z1P4 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC18.69■□□□□ 0.58
Lgr5Q9Z1P4 CT025555.1-201ENSMUST00000225901 1217 ntBASIC18.69■□□□□ 0.58
Lgr5Q9Z1P4 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lgr5Q9Z1P4 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lgr5Q9Z1P4 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lgr5Q9Z1P4 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lgr5Q9Z1P4 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lgr5Q9Z1P4 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Lgr5Q9Z1P4 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lgr5Q9Z1P4 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lgr5Q9Z1P4 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lgr5Q9Z1P4 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Lgr5Q9Z1P4 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC18.69■□□□□ 0.58
Lgr5Q9Z1P4 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.69■□□□□ 0.58
Lgr5Q9Z1P4 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lgr5Q9Z1P4 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.68■□□□□ 0.58
Lgr5Q9Z1P4 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Lgr5Q9Z1P4 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Lgr5Q9Z1P4 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lgr5Q9Z1P4 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lgr5Q9Z1P4 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lgr5Q9Z1P4 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC18.68■□□□□ 0.58
Lgr5Q9Z1P4 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC18.68■□□□□ 0.58
Lgr5Q9Z1P4 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC18.68■□□□□ 0.58
Lgr5Q9Z1P4 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Lgr5Q9Z1P4 Gm43125-201ENSMUST00000201724 730 ntBASIC18.68■□□□□ 0.58
Lgr5Q9Z1P4 Gm20949-201ENSMUST00000206478 952 ntBASIC18.68■□□□□ 0.58
Lgr5Q9Z1P4 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lgr5Q9Z1P4 AC157650.3-201ENSMUST00000225058 1476 ntBASIC18.68■□□□□ 0.58
Lgr5Q9Z1P4 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC18.68■□□□□ 0.58
Lgr5Q9Z1P4 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lgr5Q9Z1P4 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lgr5Q9Z1P4 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC18.68■□□□□ 0.58
Lgr5Q9Z1P4 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lgr5Q9Z1P4 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Lgr5Q9Z1P4 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Lgr5Q9Z1P4 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lgr5Q9Z1P4 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC18.68■□□□□ 0.58
Lgr5Q9Z1P4 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lgr5Q9Z1P4 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Lgr5Q9Z1P4 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lgr5Q9Z1P4 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.67■□□□□ 0.58
Lgr5Q9Z1P4 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Lgr5Q9Z1P4 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lgr5Q9Z1P4 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lgr5Q9Z1P4 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lgr5Q9Z1P4 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lgr5Q9Z1P4 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lgr5Q9Z1P4 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC18.67■□□□□ 0.58
Lgr5Q9Z1P4 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Lgr5Q9Z1P4 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC18.67■□□□□ 0.58
Lgr5Q9Z1P4 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC18.67■□□□□ 0.58
Lgr5Q9Z1P4 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Lgr5Q9Z1P4 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Lgr5Q9Z1P4 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC18.67■□□□□ 0.58
Lgr5Q9Z1P4 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lgr5Q9Z1P4 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Lgr5Q9Z1P4 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lgr5Q9Z1P4 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lgr5Q9Z1P4 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Lgr5Q9Z1P4 Nudt18-203ENSMUST00000228768 1578 ntBASIC18.67■□□□□ 0.58
Lgr5Q9Z1P4 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Lgr5Q9Z1P4 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Lgr5Q9Z1P4 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Lgr5Q9Z1P4 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lgr5Q9Z1P4 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Lgr5Q9Z1P4 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Lgr5Q9Z1P4 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lgr5Q9Z1P4 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lgr5Q9Z1P4 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lgr5Q9Z1P4 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Lgr5Q9Z1P4 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lgr5Q9Z1P4 Gm14722-201ENSMUST00000118943 689 ntBASIC18.66■□□□□ 0.58
Lgr5Q9Z1P4 Rprl2-201ENSMUST00000157150 290 ntBASIC18.66■□□□□ 0.58
Lgr5Q9Z1P4 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lgr5Q9Z1P4 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lgr5Q9Z1P4 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lgr5Q9Z1P4 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lgr5Q9Z1P4 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Lgr5Q9Z1P4 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Lgr5Q9Z1P4 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Lgr5Q9Z1P4 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lgr5Q9Z1P4 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lgr5Q9Z1P4 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lgr5Q9Z1P4 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Lgr5Q9Z1P4 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Lgr5Q9Z1P4 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Lgr5Q9Z1P4 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lgr5Q9Z1P4 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.65■□□□□ 0.58
Lgr5Q9Z1P4 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lgr5Q9Z1P4 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Lgr5Q9Z1P4 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC18.65■□□□□ 0.58
Lgr5Q9Z1P4 AC140397.2-201ENSMUST00000224213 834 ntBASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms