Protein–RNA interactions for Protein: Q9Z0M3

Cdh20, Cadherin-20, mousemouse

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh20Q9Z0M3 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdh20Q9Z0M3 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdh20Q9Z0M3 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdh20Q9Z0M3 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh20Q9Z0M3 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh20Q9Z0M3 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Cdh20Q9Z0M3 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh20Q9Z0M3 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh20Q9Z0M3 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh20Q9Z0M3 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh20Q9Z0M3 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Cdh20Q9Z0M3 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh20Q9Z0M3 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.54□□□□□ -0.08
Cdh20Q9Z0M3 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh20Q9Z0M3 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh20Q9Z0M3 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh20Q9Z0M3 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh20Q9Z0M3 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Cdh20Q9Z0M3 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh20Q9Z0M3 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh20Q9Z0M3 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh20Q9Z0M3 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh20Q9Z0M3 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh20Q9Z0M3 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh20Q9Z0M3 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh20Q9Z0M3 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdh20Q9Z0M3 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh20Q9Z0M3 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh20Q9Z0M3 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh20Q9Z0M3 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh20Q9Z0M3 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Cdh20Q9Z0M3 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh20Q9Z0M3 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.53□□□□□ -0.08
Cdh20Q9Z0M3 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh20Q9Z0M3 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh20Q9Z0M3 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh20Q9Z0M3 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Cdh20Q9Z0M3 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Cdh20Q9Z0M3 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh20Q9Z0M3 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.53□□□□□ -0.08
Cdh20Q9Z0M3 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Cdh20Q9Z0M3 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Cdh20Q9Z0M3 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Cdh20Q9Z0M3 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.53□□□□□ -0.08
Cdh20Q9Z0M3 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.53□□□□□ -0.08
Cdh20Q9Z0M3 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh20Q9Z0M3 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh20Q9Z0M3 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh20Q9Z0M3 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh20Q9Z0M3 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.53□□□□□ -0.08
Cdh20Q9Z0M3 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh20Q9Z0M3 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh20Q9Z0M3 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh20Q9Z0M3 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh20Q9Z0M3 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.53□□□□□ -0.08
Cdh20Q9Z0M3 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh20Q9Z0M3 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh20Q9Z0M3 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
Cdh20Q9Z0M3 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh20Q9Z0M3 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh20Q9Z0M3 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Cdh20Q9Z0M3 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh20Q9Z0M3 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh20Q9Z0M3 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Cdh20Q9Z0M3 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.52□□□□□ -0.08
Cdh20Q9Z0M3 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh20Q9Z0M3 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh20Q9Z0M3 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh20Q9Z0M3 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh20Q9Z0M3 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh20Q9Z0M3 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.52□□□□□ -0.09
Cdh20Q9Z0M3 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh20Q9Z0M3 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh20Q9Z0M3 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Cdh20Q9Z0M3 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.52□□□□□ -0.09
Cdh20Q9Z0M3 Gm27357-201ENSMUST00000183754 135 ntBASIC14.52□□□□□ -0.09
Cdh20Q9Z0M3 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.52□□□□□ -0.09
Cdh20Q9Z0M3 Gm9172-201ENSMUST00000212092 954 ntBASIC14.52□□□□□ -0.09
Cdh20Q9Z0M3 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.52□□□□□ -0.09
Cdh20Q9Z0M3 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.52□□□□□ -0.09
Cdh20Q9Z0M3 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Cdh20Q9Z0M3 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh20Q9Z0M3 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Cdh20Q9Z0M3 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh20Q9Z0M3 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh20Q9Z0M3 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh20Q9Z0M3 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh20Q9Z0M3 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh20Q9Z0M3 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh20Q9Z0M3 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Cdh20Q9Z0M3 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh20Q9Z0M3 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh20Q9Z0M3 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh20Q9Z0M3 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh20Q9Z0M3 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh20Q9Z0M3 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh20Q9Z0M3 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh20Q9Z0M3 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh20Q9Z0M3 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh20Q9Z0M3 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms