Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ClcnkaQ9WUB7 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
ClcnkaQ9WUB7 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ClcnkaQ9WUB7 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ClcnkaQ9WUB7 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
ClcnkaQ9WUB7 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
ClcnkaQ9WUB7 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ClcnkaQ9WUB7 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClcnkaQ9WUB7 App-207ENSMUST00000227737 2827 ntBASIC14.47□□□□□ -0.09
ClcnkaQ9WUB7 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClcnkaQ9WUB7 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClcnkaQ9WUB7 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ClcnkaQ9WUB7 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ClcnkaQ9WUB7 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClcnkaQ9WUB7 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
ClcnkaQ9WUB7 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ClcnkaQ9WUB7 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ClcnkaQ9WUB7 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ClcnkaQ9WUB7 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClcnkaQ9WUB7 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
ClcnkaQ9WUB7 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClcnkaQ9WUB7 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.47□□□□□ -0.09
ClcnkaQ9WUB7 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClcnkaQ9WUB7 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.47□□□□□ -0.09
ClcnkaQ9WUB7 Mir6404-201ENSMUST00000183699 94 ntBASIC14.47□□□□□ -0.09
ClcnkaQ9WUB7 Gm17807-201ENSMUST00000186869 298 ntBASIC14.47□□□□□ -0.09
ClcnkaQ9WUB7 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.47□□□□□ -0.09
ClcnkaQ9WUB7 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClcnkaQ9WUB7 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClcnkaQ9WUB7 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
ClcnkaQ9WUB7 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClcnkaQ9WUB7 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClcnkaQ9WUB7 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
ClcnkaQ9WUB7 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClcnkaQ9WUB7 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClcnkaQ9WUB7 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClcnkaQ9WUB7 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ClcnkaQ9WUB7 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.46□□□□□ -0.09
ClcnkaQ9WUB7 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ClcnkaQ9WUB7 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClcnkaQ9WUB7 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClcnkaQ9WUB7 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClcnkaQ9WUB7 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClcnkaQ9WUB7 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
ClcnkaQ9WUB7 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClcnkaQ9WUB7 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClcnkaQ9WUB7 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.46□□□□□ -0.09
ClcnkaQ9WUB7 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClcnkaQ9WUB7 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
ClcnkaQ9WUB7 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClcnkaQ9WUB7 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClcnkaQ9WUB7 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
ClcnkaQ9WUB7 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ClcnkaQ9WUB7 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.46□□□□□ -0.09
ClcnkaQ9WUB7 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.46□□□□□ -0.09
ClcnkaQ9WUB7 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClcnkaQ9WUB7 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClcnkaQ9WUB7 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClcnkaQ9WUB7 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
ClcnkaQ9WUB7 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClcnkaQ9WUB7 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClcnkaQ9WUB7 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClcnkaQ9WUB7 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
ClcnkaQ9WUB7 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ClcnkaQ9WUB7 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
ClcnkaQ9WUB7 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
ClcnkaQ9WUB7 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
ClcnkaQ9WUB7 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
ClcnkaQ9WUB7 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClcnkaQ9WUB7 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
ClcnkaQ9WUB7 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClcnkaQ9WUB7 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ClcnkaQ9WUB7 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ClcnkaQ9WUB7 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClcnkaQ9WUB7 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClcnkaQ9WUB7 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ClcnkaQ9WUB7 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
ClcnkaQ9WUB7 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
ClcnkaQ9WUB7 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.45□□□□□ -0.1
ClcnkaQ9WUB7 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
ClcnkaQ9WUB7 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ClcnkaQ9WUB7 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClcnkaQ9WUB7 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.45□□□□□ -0.1
ClcnkaQ9WUB7 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ClcnkaQ9WUB7 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClcnkaQ9WUB7 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ClcnkaQ9WUB7 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
ClcnkaQ9WUB7 Gm44454-201ENSMUST00000198541 138 ntBASIC14.45□□□□□ -0.1
ClcnkaQ9WUB7 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClcnkaQ9WUB7 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClcnkaQ9WUB7 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.45□□□□□ -0.1
ClcnkaQ9WUB7 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ClcnkaQ9WUB7 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClcnkaQ9WUB7 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClcnkaQ9WUB7 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClcnkaQ9WUB7 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClcnkaQ9WUB7 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ClcnkaQ9WUB7 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
ClcnkaQ9WUB7 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ClcnkaQ9WUB7 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms