Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nubp1Q9R060 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nubp1Q9R060 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Nubp1Q9R060 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nubp1Q9R060 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nubp1Q9R060 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nubp1Q9R060 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nubp1Q9R060 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nubp1Q9R060 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nubp1Q9R060 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.78□□□□□ -0.2
Nubp1Q9R060 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nubp1Q9R060 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nubp1Q9R060 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nubp1Q9R060 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nubp1Q9R060 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Nubp1Q9R060 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nubp1Q9R060 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Nubp1Q9R060 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.77□□□□□ -0.21
Nubp1Q9R060 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.77□□□□□ -0.21
Nubp1Q9R060 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nubp1Q9R060 Mir1895-201ENSMUST00000122615 79 ntBASIC13.77□□□□□ -0.21
Nubp1Q9R060 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nubp1Q9R060 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.77□□□□□ -0.21
Nubp1Q9R060 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.77□□□□□ -0.21
Nubp1Q9R060 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nubp1Q9R060 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Nubp1Q9R060 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nubp1Q9R060 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nubp1Q9R060 Gm38188-201ENSMUST00000192879 856 ntBASIC13.77□□□□□ -0.21
Nubp1Q9R060 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.77□□□□□ -0.21
Nubp1Q9R060 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nubp1Q9R060 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Nubp1Q9R060 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nubp1Q9R060 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nubp1Q9R060 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nubp1Q9R060 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nubp1Q9R060 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nubp1Q9R060 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Nubp1Q9R060 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC13.77□□□□□ -0.21
Nubp1Q9R060 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nubp1Q9R060 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nubp1Q9R060 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nubp1Q9R060 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nubp1Q9R060 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nubp1Q9R060 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nubp1Q9R060 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.76□□□□□ -0.21
Nubp1Q9R060 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.76□□□□□ -0.21
Nubp1Q9R060 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nubp1Q9R060 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nubp1Q9R060 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nubp1Q9R060 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nubp1Q9R060 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nubp1Q9R060 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nubp1Q9R060 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nubp1Q9R060 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nubp1Q9R060 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nubp1Q9R060 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nubp1Q9R060 Gm13333-201ENSMUST00000119424 781 ntBASIC13.76□□□□□ -0.21
Nubp1Q9R060 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.76□□□□□ -0.21
Nubp1Q9R060 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.76□□□□□ -0.21
Nubp1Q9R060 Gm25406-201ENSMUST00000157599 105 ntBASIC13.76□□□□□ -0.21
Nubp1Q9R060 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nubp1Q9R060 Gm44270-201ENSMUST00000203084 1234 ntBASIC13.76□□□□□ -0.21
Nubp1Q9R060 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.76□□□□□ -0.21
Nubp1Q9R060 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.76□□□□□ -0.21
Nubp1Q9R060 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.76□□□□□ -0.21
Nubp1Q9R060 AC154757.2-201ENSMUST00000228885 743 ntBASIC13.76□□□□□ -0.21
Nubp1Q9R060 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nubp1Q9R060 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Nubp1Q9R060 Gm10478-201ENSMUST00000084451 396 ntBASIC13.76□□□□□ -0.21
Nubp1Q9R060 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Nubp1Q9R060 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nubp1Q9R060 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.76□□□□□ -0.21
Nubp1Q9R060 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nubp1Q9R060 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nubp1Q9R060 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nubp1Q9R060 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nubp1Q9R060 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nubp1Q9R060 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nubp1Q9R060 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nubp1Q9R060 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nubp1Q9R060 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nubp1Q9R060 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nubp1Q9R060 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nubp1Q9R060 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nubp1Q9R060 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Nubp1Q9R060 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nubp1Q9R060 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.75□□□□□ -0.21
Nubp1Q9R060 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nubp1Q9R060 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nubp1Q9R060 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nubp1Q9R060 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nubp1Q9R060 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nubp1Q9R060 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nubp1Q9R060 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nubp1Q9R060 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nubp1Q9R060 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nubp1Q9R060 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.75□□□□□ -0.21
Nubp1Q9R060 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nubp1Q9R060 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms