Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Clcf1Q9QZM3 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Clcf1Q9QZM3 Gm25745-201ENSMUST00000174945 133 ntBASIC14.26□□□□□ -0.13
Clcf1Q9QZM3 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Clcf1Q9QZM3 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.26□□□□□ -0.13
Clcf1Q9QZM3 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.26□□□□□ -0.13
Clcf1Q9QZM3 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.26□□□□□ -0.13
Clcf1Q9QZM3 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.26□□□□□ -0.13
Clcf1Q9QZM3 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clcf1Q9QZM3 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Clcf1Q9QZM3 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.26□□□□□ -0.13
Clcf1Q9QZM3 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.26□□□□□ -0.13
Clcf1Q9QZM3 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clcf1Q9QZM3 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clcf1Q9QZM3 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Clcf1Q9QZM3 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clcf1Q9QZM3 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Clcf1Q9QZM3 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Clcf1Q9QZM3 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Clcf1Q9QZM3 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.26□□□□□ -0.13
Clcf1Q9QZM3 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Clcf1Q9QZM3 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clcf1Q9QZM3 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Clcf1Q9QZM3 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clcf1Q9QZM3 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Clcf1Q9QZM3 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Clcf1Q9QZM3 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clcf1Q9QZM3 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clcf1Q9QZM3 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clcf1Q9QZM3 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Clcf1Q9QZM3 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Clcf1Q9QZM3 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clcf1Q9QZM3 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clcf1Q9QZM3 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Clcf1Q9QZM3 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clcf1Q9QZM3 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clcf1Q9QZM3 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.25□□□□□ -0.13
Clcf1Q9QZM3 Gm11452-201ENSMUST00000122376 690 ntBASIC14.25□□□□□ -0.13
Clcf1Q9QZM3 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clcf1Q9QZM3 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clcf1Q9QZM3 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Clcf1Q9QZM3 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Clcf1Q9QZM3 Gm44357-201ENSMUST00000195897 142 ntBASIC14.25□□□□□ -0.13
Clcf1Q9QZM3 Gm19658-201ENSMUST00000196231 138 ntBASIC14.25□□□□□ -0.13
Clcf1Q9QZM3 Gm44367-201ENSMUST00000196836 138 ntBASIC14.25□□□□□ -0.13
Clcf1Q9QZM3 Gm44350-201ENSMUST00000197197 138 ntBASIC14.25□□□□□ -0.13
Clcf1Q9QZM3 Gm44390-201ENSMUST00000197533 144 ntBASIC14.25□□□□□ -0.13
Clcf1Q9QZM3 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clcf1Q9QZM3 Gm44313-201ENSMUST00000198018 138 ntBASIC14.25□□□□□ -0.13
Clcf1Q9QZM3 Gm44486-201ENSMUST00000198508 138 ntBASIC14.25□□□□□ -0.13
Clcf1Q9QZM3 Gm44314-201ENSMUST00000199263 138 ntBASIC14.25□□□□□ -0.13
Clcf1Q9QZM3 Gm44394-201ENSMUST00000199558 138 ntBASIC14.25□□□□□ -0.13
Clcf1Q9QZM3 Gm44484-201ENSMUST00000199873 138 ntBASIC14.25□□□□□ -0.13
Clcf1Q9QZM3 Gm44466-201ENSMUST00000200264 138 ntBASIC14.25□□□□□ -0.13
Clcf1Q9QZM3 Gm44359-201ENSMUST00000200671 138 ntBASIC14.25□□□□□ -0.13
Clcf1Q9QZM3 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clcf1Q9QZM3 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Clcf1Q9QZM3 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clcf1Q9QZM3 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Clcf1Q9QZM3 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Clcf1Q9QZM3 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Clcf1Q9QZM3 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.25□□□□□ -0.13
Clcf1Q9QZM3 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clcf1Q9QZM3 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clcf1Q9QZM3 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clcf1Q9QZM3 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Clcf1Q9QZM3 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clcf1Q9QZM3 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.25□□□□□ -0.13
Clcf1Q9QZM3 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clcf1Q9QZM3 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clcf1Q9QZM3 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Clcf1Q9QZM3 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clcf1Q9QZM3 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clcf1Q9QZM3 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Clcf1Q9QZM3 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Clcf1Q9QZM3 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clcf1Q9QZM3 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clcf1Q9QZM3 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clcf1Q9QZM3 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Clcf1Q9QZM3 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clcf1Q9QZM3 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Clcf1Q9QZM3 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.24□□□□□ -0.13
Clcf1Q9QZM3 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Clcf1Q9QZM3 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.24□□□□□ -0.13
Clcf1Q9QZM3 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.24□□□□□ -0.13
Clcf1Q9QZM3 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.24□□□□□ -0.13
Clcf1Q9QZM3 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clcf1Q9QZM3 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clcf1Q9QZM3 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clcf1Q9QZM3 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clcf1Q9QZM3 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Clcf1Q9QZM3 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clcf1Q9QZM3 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clcf1Q9QZM3 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clcf1Q9QZM3 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clcf1Q9QZM3 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clcf1Q9QZM3 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.24□□□□□ -0.13
Clcf1Q9QZM3 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Clcf1Q9QZM3 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clcf1Q9QZM3 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 183 ms