Protein–RNA interactions for Protein: Q9QZ88

Vps29, Vacuolar protein sorting-associated protein 29, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps29Q9QZ88 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.04■□□□□ -0
Vps29Q9QZ88 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Vps29Q9QZ88 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Vps29Q9QZ88 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.04■□□□□ -0
Vps29Q9QZ88 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.04■□□□□ -0
Vps29Q9QZ88 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.04■□□□□ -0
Vps29Q9QZ88 Gm27704-201ENSMUST00000185094 107 ntBASIC15.04■□□□□ -0
Vps29Q9QZ88 Gm44454-201ENSMUST00000198541 138 ntBASIC15.04■□□□□ -0
Vps29Q9QZ88 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.04■□□□□ -0
Vps29Q9QZ88 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.04■□□□□ -0
Vps29Q9QZ88 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Vps29Q9QZ88 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Vps29Q9QZ88 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps29Q9QZ88 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Vps29Q9QZ88 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps29Q9QZ88 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps29Q9QZ88 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.04■□□□□ -0
Vps29Q9QZ88 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps29Q9QZ88 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Vps29Q9QZ88 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Vps29Q9QZ88 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.03■□□□□ -0
Vps29Q9QZ88 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps29Q9QZ88 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
Vps29Q9QZ88 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps29Q9QZ88 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps29Q9QZ88 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vps29Q9QZ88 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Vps29Q9QZ88 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vps29Q9QZ88 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps29Q9QZ88 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps29Q9QZ88 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Vps29Q9QZ88 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Vps29Q9QZ88 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps29Q9QZ88 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Vps29Q9QZ88 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Vps29Q9QZ88 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps29Q9QZ88 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps29Q9QZ88 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps29Q9QZ88 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps29Q9QZ88 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Vps29Q9QZ88 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Vps29Q9QZ88 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps29Q9QZ88 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps29Q9QZ88 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vps29Q9QZ88 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vps29Q9QZ88 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vps29Q9QZ88 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Vps29Q9QZ88 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Vps29Q9QZ88 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.02■□□□□ -0
Vps29Q9QZ88 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.02■□□□□ -0
Vps29Q9QZ88 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vps29Q9QZ88 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.02■□□□□ -0
Vps29Q9QZ88 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Vps29Q9QZ88 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.02■□□□□ -0
Vps29Q9QZ88 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vps29Q9QZ88 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.02■□□□□ -0
Vps29Q9QZ88 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
Vps29Q9QZ88 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.02■□□□□ -0
Vps29Q9QZ88 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.02■□□□□ -0
Vps29Q9QZ88 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vps29Q9QZ88 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps29Q9QZ88 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.02□□□□□ -0.01
Vps29Q9QZ88 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Vps29Q9QZ88 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps29Q9QZ88 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps29Q9QZ88 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps29Q9QZ88 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.01□□□□□ -0.01
Vps29Q9QZ88 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps29Q9QZ88 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps29Q9QZ88 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps29Q9QZ88 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps29Q9QZ88 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.01□□□□□ -0.01
Vps29Q9QZ88 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Vps29Q9QZ88 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps29Q9QZ88 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Vps29Q9QZ88 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.01□□□□□ -0.01
Vps29Q9QZ88 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Vps29Q9QZ88 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.01□□□□□ -0.01
Vps29Q9QZ88 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.01□□□□□ -0.01
Vps29Q9QZ88 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps29Q9QZ88 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps29Q9QZ88 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps29Q9QZ88 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps29Q9QZ88 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps29Q9QZ88 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps29Q9QZ88 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps29Q9QZ88 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps29Q9QZ88 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps29Q9QZ88 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.01□□□□□ -0.01
Vps29Q9QZ88 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps29Q9QZ88 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps29Q9QZ88 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.01□□□□□ -0.01
Vps29Q9QZ88 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps29Q9QZ88 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps29Q9QZ88 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Vps29Q9QZ88 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps29Q9QZ88 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15□□□□□ -0.01
Vps29Q9QZ88 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Vps29Q9QZ88 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Vps29Q9QZ88 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms