Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chaf1aQ9QWF0 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chaf1aQ9QWF0 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Chaf1aQ9QWF0 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Chaf1aQ9QWF0 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chaf1aQ9QWF0 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chaf1aQ9QWF0 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chaf1aQ9QWF0 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Chaf1aQ9QWF0 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chaf1aQ9QWF0 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chaf1aQ9QWF0 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Chaf1aQ9QWF0 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Chaf1aQ9QWF0 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Chaf1aQ9QWF0 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chaf1aQ9QWF0 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chaf1aQ9QWF0 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chaf1aQ9QWF0 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chaf1aQ9QWF0 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chaf1aQ9QWF0 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chaf1aQ9QWF0 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Chaf1aQ9QWF0 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chaf1aQ9QWF0 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Chaf1aQ9QWF0 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chaf1aQ9QWF0 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Chaf1aQ9QWF0 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Chaf1aQ9QWF0 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.61■□□□□ 0.41
Chaf1aQ9QWF0 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.61■□□□□ 0.41
Chaf1aQ9QWF0 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Chaf1aQ9QWF0 Gm18032-201ENSMUST00000222541 538 ntBASIC17.61■□□□□ 0.41
Chaf1aQ9QWF0 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chaf1aQ9QWF0 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chaf1aQ9QWF0 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chaf1aQ9QWF0 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chaf1aQ9QWF0 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chaf1aQ9QWF0 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Chaf1aQ9QWF0 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.61■□□□□ 0.41
Chaf1aQ9QWF0 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chaf1aQ9QWF0 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chaf1aQ9QWF0 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Chaf1aQ9QWF0 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Chaf1aQ9QWF0 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chaf1aQ9QWF0 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.61■□□□□ 0.41
Chaf1aQ9QWF0 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.61■□□□□ 0.41
Chaf1aQ9QWF0 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.61■□□□□ 0.41
Chaf1aQ9QWF0 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chaf1aQ9QWF0 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chaf1aQ9QWF0 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chaf1aQ9QWF0 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17.6■□□□□ 0.41
Chaf1aQ9QWF0 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chaf1aQ9QWF0 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chaf1aQ9QWF0 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chaf1aQ9QWF0 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chaf1aQ9QWF0 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chaf1aQ9QWF0 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.6■□□□□ 0.41
Chaf1aQ9QWF0 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chaf1aQ9QWF0 Gm11355-201ENSMUST00000121120 306 ntBASIC17.6■□□□□ 0.41
Chaf1aQ9QWF0 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chaf1aQ9QWF0 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
Chaf1aQ9QWF0 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.6■□□□□ 0.41
Chaf1aQ9QWF0 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Chaf1aQ9QWF0 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.6■□□□□ 0.41
Chaf1aQ9QWF0 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Chaf1aQ9QWF0 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chaf1aQ9QWF0 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chaf1aQ9QWF0 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chaf1aQ9QWF0 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chaf1aQ9QWF0 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chaf1aQ9QWF0 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chaf1aQ9QWF0 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chaf1aQ9QWF0 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chaf1aQ9QWF0 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chaf1aQ9QWF0 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chaf1aQ9QWF0 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chaf1aQ9QWF0 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Chaf1aQ9QWF0 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Chaf1aQ9QWF0 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Chaf1aQ9QWF0 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Chaf1aQ9QWF0 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chaf1aQ9QWF0 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.59■□□□□ 0.41
Chaf1aQ9QWF0 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chaf1aQ9QWF0 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chaf1aQ9QWF0 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chaf1aQ9QWF0 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Chaf1aQ9QWF0 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chaf1aQ9QWF0 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chaf1aQ9QWF0 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chaf1aQ9QWF0 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chaf1aQ9QWF0 Mir770-201ENSMUST00000103252 94 ntBASIC17.59■□□□□ 0.41
Chaf1aQ9QWF0 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.59■□□□□ 0.41
Chaf1aQ9QWF0 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chaf1aQ9QWF0 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chaf1aQ9QWF0 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Chaf1aQ9QWF0 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chaf1aQ9QWF0 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chaf1aQ9QWF0 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chaf1aQ9QWF0 Gm9987-201ENSMUST00000069768 567 ntBASIC17.59■□□□□ 0.41
Chaf1aQ9QWF0 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chaf1aQ9QWF0 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chaf1aQ9QWF0 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chaf1aQ9QWF0 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms