Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Rbfox1Q9JJ43 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rbfox1Q9JJ43 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rbfox1Q9JJ43 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
Rbfox1Q9JJ43 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rbfox1Q9JJ43 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.4□□□□□ -0.26
Rbfox1Q9JJ43 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rbfox1Q9JJ43 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Rbfox1Q9JJ43 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Rbfox1Q9JJ43 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Rbfox1Q9JJ43 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.39□□□□□ -0.27
Rbfox1Q9JJ43 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rbfox1Q9JJ43 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rbfox1Q9JJ43 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Rbfox1Q9JJ43 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rbfox1Q9JJ43 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rbfox1Q9JJ43 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Rbfox1Q9JJ43 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rbfox1Q9JJ43 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rbfox1Q9JJ43 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rbfox1Q9JJ43 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rbfox1Q9JJ43 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rbfox1Q9JJ43 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rbfox1Q9JJ43 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rbfox1Q9JJ43 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rbfox1Q9JJ43 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.39□□□□□ -0.27
Rbfox1Q9JJ43 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Rbfox1Q9JJ43 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.39□□□□□ -0.27
Rbfox1Q9JJ43 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rbfox1Q9JJ43 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rbfox1Q9JJ43 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rbfox1Q9JJ43 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rbfox1Q9JJ43 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
Rbfox1Q9JJ43 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rbfox1Q9JJ43 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rbfox1Q9JJ43 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Rbfox1Q9JJ43 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.39□□□□□ -0.27
Rbfox1Q9JJ43 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rbfox1Q9JJ43 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rbfox1Q9JJ43 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rbfox1Q9JJ43 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rbfox1Q9JJ43 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Rbfox1Q9JJ43 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rbfox1Q9JJ43 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rbfox1Q9JJ43 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.39□□□□□ -0.27
Rbfox1Q9JJ43 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rbfox1Q9JJ43 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rbfox1Q9JJ43 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rbfox1Q9JJ43 Zkscan4-202ENSMUST00000225845 1506 ntBASIC13.39□□□□□ -0.27
Rbfox1Q9JJ43 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rbfox1Q9JJ43 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rbfox1Q9JJ43 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rbfox1Q9JJ43 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rbfox1Q9JJ43 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rbfox1Q9JJ43 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Rbfox1Q9JJ43 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rbfox1Q9JJ43 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rbfox1Q9JJ43 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rbfox1Q9JJ43 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rbfox1Q9JJ43 Gm10013-201ENSMUST00000106074 672 ntBASIC13.38□□□□□ -0.27
Rbfox1Q9JJ43 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rbfox1Q9JJ43 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC13.38□□□□□ -0.27
Rbfox1Q9JJ43 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.38□□□□□ -0.27
Rbfox1Q9JJ43 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rbfox1Q9JJ43 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rbfox1Q9JJ43 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rbfox1Q9JJ43 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Rbfox1Q9JJ43 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rbfox1Q9JJ43 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rbfox1Q9JJ43 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rbfox1Q9JJ43 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rbfox1Q9JJ43 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rbfox1Q9JJ43 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rbfox1Q9JJ43 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rbfox1Q9JJ43 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rbfox1Q9JJ43 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rbfox1Q9JJ43 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rbfox1Q9JJ43 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rbfox1Q9JJ43 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rbfox1Q9JJ43 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rbfox1Q9JJ43 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Rbfox1Q9JJ43 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Rbfox1Q9JJ43 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rbfox1Q9JJ43 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rbfox1Q9JJ43 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rbfox1Q9JJ43 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rbfox1Q9JJ43 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rbfox1Q9JJ43 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Rbfox1Q9JJ43 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rbfox1Q9JJ43 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rbfox1Q9JJ43 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Rbfox1Q9JJ43 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Rbfox1Q9JJ43 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rbfox1Q9JJ43 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Rbfox1Q9JJ43 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.37□□□□□ -0.27
Rbfox1Q9JJ43 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rbfox1Q9JJ43 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rbfox1Q9JJ43 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rbfox1Q9JJ43 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rbfox1Q9JJ43 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms