Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
U2af1Q9D883 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC20.62■□□□□ 0.89
U2af1Q9D883 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC20.62■□□□□ 0.89
U2af1Q9D883 Gm6443-201ENSMUST00000203599 874 ntBASIC20.62■□□□□ 0.89
U2af1Q9D883 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC20.62■□□□□ 0.89
U2af1Q9D883 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
U2af1Q9D883 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
U2af1Q9D883 Gm42473-201ENSMUST00000201056 2291 ntBASIC20.62■□□□□ 0.89
U2af1Q9D883 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
U2af1Q9D883 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
U2af1Q9D883 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
U2af1Q9D883 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
U2af1Q9D883 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC20.61■□□□□ 0.89
U2af1Q9D883 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
U2af1Q9D883 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
U2af1Q9D883 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
U2af1Q9D883 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
U2af1Q9D883 Gm13036-201ENSMUST00000117799 748 ntBASIC20.61■□□□□ 0.89
U2af1Q9D883 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC20.61■□□□□ 0.89
U2af1Q9D883 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
U2af1Q9D883 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
U2af1Q9D883 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
U2af1Q9D883 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
U2af1Q9D883 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC20.61■□□□□ 0.89
U2af1Q9D883 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
U2af1Q9D883 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
U2af1Q9D883 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
U2af1Q9D883 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
U2af1Q9D883 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
U2af1Q9D883 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
U2af1Q9D883 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
U2af1Q9D883 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
U2af1Q9D883 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
U2af1Q9D883 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
U2af1Q9D883 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
U2af1Q9D883 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
U2af1Q9D883 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
U2af1Q9D883 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
U2af1Q9D883 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
U2af1Q9D883 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
U2af1Q9D883 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
U2af1Q9D883 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
U2af1Q9D883 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
U2af1Q9D883 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
U2af1Q9D883 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
U2af1Q9D883 Gm6184-201ENSMUST00000120403 1261 ntBASIC20.6■□□□□ 0.89
U2af1Q9D883 Gm1401-201ENSMUST00000122048 772 ntBASIC20.6■□□□□ 0.89
U2af1Q9D883 Gm2308-201ENSMUST00000166539 1004 ntBASIC20.6■□□□□ 0.89
U2af1Q9D883 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
U2af1Q9D883 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
U2af1Q9D883 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
U2af1Q9D883 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
U2af1Q9D883 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
U2af1Q9D883 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
U2af1Q9D883 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
U2af1Q9D883 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
U2af1Q9D883 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
U2af1Q9D883 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
U2af1Q9D883 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC20.59■□□□□ 0.89
U2af1Q9D883 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
U2af1Q9D883 Gm18206-201ENSMUST00000207027 926 ntBASIC20.59■□□□□ 0.89
U2af1Q9D883 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
U2af1Q9D883 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
U2af1Q9D883 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
U2af1Q9D883 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
U2af1Q9D883 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
U2af1Q9D883 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
U2af1Q9D883 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
U2af1Q9D883 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC20.59■□□□□ 0.89
U2af1Q9D883 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
U2af1Q9D883 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
U2af1Q9D883 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
U2af1Q9D883 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
U2af1Q9D883 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC20.58■□□□□ 0.89
U2af1Q9D883 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC20.58■□□□□ 0.89
U2af1Q9D883 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
U2af1Q9D883 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
U2af1Q9D883 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC20.58■□□□□ 0.89
U2af1Q9D883 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
U2af1Q9D883 Gm27628-201ENSMUST00000184911 107 ntBASIC20.58■□□□□ 0.89
U2af1Q9D883 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC20.58■□□□□ 0.89
U2af1Q9D883 AC122024.2-201ENSMUST00000220086 871 ntBASIC20.58■□□□□ 0.89
U2af1Q9D883 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
U2af1Q9D883 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
U2af1Q9D883 Gm45412-201ENSMUST00000210217 2275 ntBASIC20.58■□□□□ 0.88
U2af1Q9D883 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC20.58■□□□□ 0.88
U2af1Q9D883 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
U2af1Q9D883 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
U2af1Q9D883 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
U2af1Q9D883 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
U2af1Q9D883 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
U2af1Q9D883 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
U2af1Q9D883 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
U2af1Q9D883 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
U2af1Q9D883 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC20.57■□□□□ 0.88
U2af1Q9D883 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC20.57■□□□□ 0.88
U2af1Q9D883 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC20.57■□□□□ 0.88
U2af1Q9D883 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
U2af1Q9D883 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
U2af1Q9D883 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms