Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp5Q9D7S9 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp5Q9D7S9 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp5Q9D7S9 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp5Q9D7S9 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC19.67■□□□□ 0.74
Chmp5Q9D7S9 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp5Q9D7S9 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp5Q9D7S9 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Chmp5Q9D7S9 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp5Q9D7S9 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp5Q9D7S9 Gm16425-201ENSMUST00000118143 3130 ntBASIC19.66■□□□□ 0.74
Chmp5Q9D7S9 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp5Q9D7S9 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp5Q9D7S9 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp5Q9D7S9 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.66■□□□□ 0.74
Chmp5Q9D7S9 Gm18959-201ENSMUST00000208954 655 ntBASIC19.66■□□□□ 0.74
Chmp5Q9D7S9 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.66■□□□□ 0.74
Chmp5Q9D7S9 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp5Q9D7S9 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp5Q9D7S9 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Chmp5Q9D7S9 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp5Q9D7S9 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC19.66■□□□□ 0.74
Chmp5Q9D7S9 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp5Q9D7S9 Zkscan4-202ENSMUST00000225845 1506 ntBASIC19.66■□□□□ 0.74
Chmp5Q9D7S9 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp5Q9D7S9 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp5Q9D7S9 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp5Q9D7S9 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC19.65■□□□□ 0.74
Chmp5Q9D7S9 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp5Q9D7S9 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC19.65■□□□□ 0.74
Chmp5Q9D7S9 Gm37736-201ENSMUST00000193564 2802 ntBASIC19.65■□□□□ 0.74
Chmp5Q9D7S9 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp5Q9D7S9 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp5Q9D7S9 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
Chmp5Q9D7S9 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.65■□□□□ 0.74
Chmp5Q9D7S9 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC19.65■□□□□ 0.74
Chmp5Q9D7S9 CT009713.7-201ENSMUST00000224689 571 ntBASIC19.65■□□□□ 0.74
Chmp5Q9D7S9 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp5Q9D7S9 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp5Q9D7S9 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp5Q9D7S9 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Chmp5Q9D7S9 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp5Q9D7S9 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp5Q9D7S9 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Chmp5Q9D7S9 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp5Q9D7S9 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp5Q9D7S9 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp5Q9D7S9 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp5Q9D7S9 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Chmp5Q9D7S9 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Chmp5Q9D7S9 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Chmp5Q9D7S9 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Chmp5Q9D7S9 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC19.64■□□□□ 0.74
Chmp5Q9D7S9 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp5Q9D7S9 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.64■□□□□ 0.73
Chmp5Q9D7S9 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC19.64■□□□□ 0.73
Chmp5Q9D7S9 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.64■□□□□ 0.73
Chmp5Q9D7S9 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp5Q9D7S9 Gm21559-201ENSMUST00000220638 855 ntBASIC19.64■□□□□ 0.73
Chmp5Q9D7S9 Gm8587-201ENSMUST00000076538 843 ntBASIC19.64■□□□□ 0.73
Chmp5Q9D7S9 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Chmp5Q9D7S9 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp5Q9D7S9 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp5Q9D7S9 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp5Q9D7S9 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp5Q9D7S9 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Chmp5Q9D7S9 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp5Q9D7S9 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp5Q9D7S9 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp5Q9D7S9 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp5Q9D7S9 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp5Q9D7S9 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp5Q9D7S9 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Chmp5Q9D7S9 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp5Q9D7S9 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Chmp5Q9D7S9 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp5Q9D7S9 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp5Q9D7S9 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp5Q9D7S9 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
Chmp5Q9D7S9 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp5Q9D7S9 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp5Q9D7S9 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp5Q9D7S9 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp5Q9D7S9 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp5Q9D7S9 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.63■□□□□ 0.73
Chmp5Q9D7S9 Gm27389-201ENSMUST00000183622 195 ntBASIC19.63■□□□□ 0.73
Chmp5Q9D7S9 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp5Q9D7S9 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Chmp5Q9D7S9 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.63■□□□□ 0.73
Chmp5Q9D7S9 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp5Q9D7S9 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp5Q9D7S9 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp5Q9D7S9 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Chmp5Q9D7S9 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp5Q9D7S9 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp5Q9D7S9 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp5Q9D7S9 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp5Q9D7S9 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Chmp5Q9D7S9 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp5Q9D7S9 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms