Protein–RNA interactions for Protein: Q9D572

Ubxn11, UBX domain-containing protein 11, mousemouse

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubxn11Q9D572 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ubxn11Q9D572 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ubxn11Q9D572 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.61■□□□□ 0.41
Ubxn11Q9D572 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ubxn11Q9D572 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ubxn11Q9D572 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.61■□□□□ 0.41
Ubxn11Q9D572 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Ubxn11Q9D572 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.61■□□□□ 0.41
Ubxn11Q9D572 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ubxn11Q9D572 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.61■□□□□ 0.41
Ubxn11Q9D572 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.61■□□□□ 0.41
Ubxn11Q9D572 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.61■□□□□ 0.41
Ubxn11Q9D572 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ubxn11Q9D572 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Ubxn11Q9D572 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ubxn11Q9D572 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ubxn11Q9D572 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ubxn11Q9D572 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Ubxn11Q9D572 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Ubxn11Q9D572 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Ubxn11Q9D572 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Ubxn11Q9D572 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Ubxn11Q9D572 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Ubxn11Q9D572 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC17.6■□□□□ 0.41
Ubxn11Q9D572 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Ubxn11Q9D572 Gm20553-201ENSMUST00000204205 844 ntBASIC17.6■□□□□ 0.41
Ubxn11Q9D572 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ubxn11Q9D572 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.6■□□□□ 0.41
Ubxn11Q9D572 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC17.6■□□□□ 0.41
Ubxn11Q9D572 AC154767.3-201ENSMUST00000225150 1342 ntBASIC17.6■□□□□ 0.41
Ubxn11Q9D572 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Ubxn11Q9D572 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ubxn11Q9D572 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ubxn11Q9D572 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ubxn11Q9D572 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ubxn11Q9D572 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ubxn11Q9D572 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ubxn11Q9D572 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ubxn11Q9D572 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubxn11Q9D572 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubxn11Q9D572 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubxn11Q9D572 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Ubxn11Q9D572 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubxn11Q9D572 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.59■□□□□ 0.41
Ubxn11Q9D572 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.59■□□□□ 0.41
Ubxn11Q9D572 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ubxn11Q9D572 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubxn11Q9D572 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ubxn11Q9D572 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ubxn11Q9D572 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ubxn11Q9D572 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ubxn11Q9D572 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Ubxn11Q9D572 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Ubxn11Q9D572 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC17.59■□□□□ 0.41
Ubxn11Q9D572 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ubxn11Q9D572 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
Ubxn11Q9D572 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubxn11Q9D572 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubxn11Q9D572 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubxn11Q9D572 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ubxn11Q9D572 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubxn11Q9D572 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubxn11Q9D572 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ubxn11Q9D572 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubxn11Q9D572 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Ubxn11Q9D572 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.58■□□□□ 0.41
Ubxn11Q9D572 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Ubxn11Q9D572 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Ubxn11Q9D572 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.58■□□□□ 0.41
Ubxn11Q9D572 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.58■□□□□ 0.4
Ubxn11Q9D572 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Ubxn11Q9D572 Gm7336-201ENSMUST00000107041 1232 ntBASIC17.58■□□□□ 0.4
Ubxn11Q9D572 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Ubxn11Q9D572 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ubxn11Q9D572 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Ubxn11Q9D572 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ubxn11Q9D572 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ubxn11Q9D572 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ubxn11Q9D572 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ubxn11Q9D572 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ubxn11Q9D572 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ubxn11Q9D572 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ubxn11Q9D572 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ubxn11Q9D572 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubxn11Q9D572 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubxn11Q9D572 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubxn11Q9D572 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubxn11Q9D572 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubxn11Q9D572 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubxn11Q9D572 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubxn11Q9D572 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ubxn11Q9D572 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ubxn11Q9D572 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC17.57■□□□□ 0.4
Ubxn11Q9D572 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.57■□□□□ 0.4
Ubxn11Q9D572 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC17.57■□□□□ 0.4
Ubxn11Q9D572 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubxn11Q9D572 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ubxn11Q9D572 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ubxn11Q9D572 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubxn11Q9D572 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms