Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Stag1Q9D3E6 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Stag1Q9D3E6 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Stag1Q9D3E6 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Stag1Q9D3E6 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Stag1Q9D3E6 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Stag1Q9D3E6 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Stag1Q9D3E6 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Stag1Q9D3E6 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Stag1Q9D3E6 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Stag1Q9D3E6 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Stag1Q9D3E6 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC18.67■□□□□ 0.58
Stag1Q9D3E6 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Stag1Q9D3E6 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Stag1Q9D3E6 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC18.67■□□□□ 0.58
Stag1Q9D3E6 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Stag1Q9D3E6 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Stag1Q9D3E6 AC151286.1-201ENSMUST00000198489 145 ntBASIC18.67■□□□□ 0.58
Stag1Q9D3E6 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Stag1Q9D3E6 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Stag1Q9D3E6 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Stag1Q9D3E6 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Stag1Q9D3E6 Gm5648-201ENSMUST00000122244 1587 ntBASIC18.67■□□□□ 0.58
Stag1Q9D3E6 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Stag1Q9D3E6 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Stag1Q9D3E6 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Stag1Q9D3E6 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Stag1Q9D3E6 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Stag1Q9D3E6 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Stag1Q9D3E6 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Stag1Q9D3E6 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Stag1Q9D3E6 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Stag1Q9D3E6 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Stag1Q9D3E6 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Stag1Q9D3E6 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.66■□□□□ 0.58
Stag1Q9D3E6 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Stag1Q9D3E6 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Stag1Q9D3E6 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.66■□□□□ 0.58
Stag1Q9D3E6 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Stag1Q9D3E6 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.66■□□□□ 0.58
Stag1Q9D3E6 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC18.66■□□□□ 0.58
Stag1Q9D3E6 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Stag1Q9D3E6 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC18.66■□□□□ 0.58
Stag1Q9D3E6 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Stag1Q9D3E6 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Stag1Q9D3E6 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Stag1Q9D3E6 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Stag1Q9D3E6 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Stag1Q9D3E6 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Stag1Q9D3E6 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Stag1Q9D3E6 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Stag1Q9D3E6 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Stag1Q9D3E6 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Stag1Q9D3E6 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Stag1Q9D3E6 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Stag1Q9D3E6 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Stag1Q9D3E6 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.65■□□□□ 0.58
Stag1Q9D3E6 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC18.65■□□□□ 0.58
Stag1Q9D3E6 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC18.65■□□□□ 0.58
Stag1Q9D3E6 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Stag1Q9D3E6 AC127302.2-201ENSMUST00000215212 268 ntBASIC18.65■□□□□ 0.58
Stag1Q9D3E6 AC159295.1-201ENSMUST00000225326 940 ntBASIC18.65■□□□□ 0.58
Stag1Q9D3E6 AC158538.2-201ENSMUST00000225455 906 ntBASIC18.65■□□□□ 0.58
Stag1Q9D3E6 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Stag1Q9D3E6 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Stag1Q9D3E6 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Stag1Q9D3E6 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Stag1Q9D3E6 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC18.65■□□□□ 0.58
Stag1Q9D3E6 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Stag1Q9D3E6 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Stag1Q9D3E6 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.64■□□□□ 0.58
Stag1Q9D3E6 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Stag1Q9D3E6 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Stag1Q9D3E6 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Stag1Q9D3E6 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Stag1Q9D3E6 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Stag1Q9D3E6 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Stag1Q9D3E6 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Stag1Q9D3E6 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Stag1Q9D3E6 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Stag1Q9D3E6 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Stag1Q9D3E6 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Stag1Q9D3E6 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Stag1Q9D3E6 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Stag1Q9D3E6 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Stag1Q9D3E6 Gm15500-202ENSMUST00000071641 1019 ntBASIC18.64■□□□□ 0.57
Stag1Q9D3E6 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Stag1Q9D3E6 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Stag1Q9D3E6 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Stag1Q9D3E6 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Stag1Q9D3E6 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Stag1Q9D3E6 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Stag1Q9D3E6 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Stag1Q9D3E6 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Stag1Q9D3E6 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Stag1Q9D3E6 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Stag1Q9D3E6 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Stag1Q9D3E6 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Stag1Q9D3E6 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Stag1Q9D3E6 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms