Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lysmd1Q9D0E3 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Lysmd1Q9D0E3 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Lysmd1Q9D0E3 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.69■□□□□ 0.26
Lysmd1Q9D0E3 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Lysmd1Q9D0E3 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Lysmd1Q9D0E3 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Lysmd1Q9D0E3 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Lysmd1Q9D0E3 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Lysmd1Q9D0E3 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC16.69■□□□□ 0.26
Lysmd1Q9D0E3 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lysmd1Q9D0E3 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lysmd1Q9D0E3 Gm43703-201ENSMUST00000200523 763 ntBASIC16.69■□□□□ 0.26
Lysmd1Q9D0E3 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Lysmd1Q9D0E3 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lysmd1Q9D0E3 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lysmd1Q9D0E3 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lysmd1Q9D0E3 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lysmd1Q9D0E3 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lysmd1Q9D0E3 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Lysmd1Q9D0E3 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Lysmd1Q9D0E3 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lysmd1Q9D0E3 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Lysmd1Q9D0E3 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Lysmd1Q9D0E3 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.68■□□□□ 0.26
Lysmd1Q9D0E3 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Lysmd1Q9D0E3 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Lysmd1Q9D0E3 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Lysmd1Q9D0E3 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Lysmd1Q9D0E3 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC16.68■□□□□ 0.26
Lysmd1Q9D0E3 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
Lysmd1Q9D0E3 AC155286.1-201ENSMUST00000218632 448 ntBASIC16.68■□□□□ 0.26
Lysmd1Q9D0E3 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Lysmd1Q9D0E3 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
Lysmd1Q9D0E3 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lysmd1Q9D0E3 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lysmd1Q9D0E3 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Lysmd1Q9D0E3 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Lysmd1Q9D0E3 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lysmd1Q9D0E3 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC16.68■□□□□ 0.26
Lysmd1Q9D0E3 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Lysmd1Q9D0E3 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Lysmd1Q9D0E3 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lysmd1Q9D0E3 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lysmd1Q9D0E3 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Lysmd1Q9D0E3 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lysmd1Q9D0E3 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lysmd1Q9D0E3 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC16.67■□□□□ 0.26
Lysmd1Q9D0E3 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Lysmd1Q9D0E3 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC16.67■□□□□ 0.26
Lysmd1Q9D0E3 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.67■□□□□ 0.26
Lysmd1Q9D0E3 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Lysmd1Q9D0E3 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lysmd1Q9D0E3 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lysmd1Q9D0E3 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lysmd1Q9D0E3 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lysmd1Q9D0E3 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lysmd1Q9D0E3 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Lysmd1Q9D0E3 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lysmd1Q9D0E3 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lysmd1Q9D0E3 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.67■□□□□ 0.26
Lysmd1Q9D0E3 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lysmd1Q9D0E3 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC16.66■□□□□ 0.26
Lysmd1Q9D0E3 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lysmd1Q9D0E3 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC16.66■□□□□ 0.26
Lysmd1Q9D0E3 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lysmd1Q9D0E3 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lysmd1Q9D0E3 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lysmd1Q9D0E3 Gm24543-201ENSMUST00000103867 82 ntBASIC16.66■□□□□ 0.26
Lysmd1Q9D0E3 Gm12390-201ENSMUST00000117897 397 ntBASIC16.66■□□□□ 0.26
Lysmd1Q9D0E3 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC16.66■□□□□ 0.26
Lysmd1Q9D0E3 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC16.66■□□□□ 0.26
Lysmd1Q9D0E3 Gm37424-201ENSMUST00000191727 561 ntBASIC16.66■□□□□ 0.26
Lysmd1Q9D0E3 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC16.66■□□□□ 0.26
Lysmd1Q9D0E3 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC16.66■□□□□ 0.26
Lysmd1Q9D0E3 Shd-206ENSMUST00000225145 998 ntBASIC16.66■□□□□ 0.26
Lysmd1Q9D0E3 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lysmd1Q9D0E3 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lysmd1Q9D0E3 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Lysmd1Q9D0E3 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lysmd1Q9D0E3 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lysmd1Q9D0E3 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lysmd1Q9D0E3 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lysmd1Q9D0E3 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Lysmd1Q9D0E3 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd1Q9D0E3 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd1Q9D0E3 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd1Q9D0E3 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd1Q9D0E3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Lysmd1Q9D0E3 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd1Q9D0E3 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd1Q9D0E3 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
Lysmd1Q9D0E3 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd1Q9D0E3 Gm27243-201ENSMUST00000183964 521 ntBASIC16.65■□□□□ 0.26
Lysmd1Q9D0E3 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Lysmd1Q9D0E3 Gm18753-201ENSMUST00000201000 566 ntBASIC16.65■□□□□ 0.26
Lysmd1Q9D0E3 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Lysmd1Q9D0E3 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd1Q9D0E3 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd1Q9D0E3 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms