Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shmt2Q9CZN7 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shmt2Q9CZN7 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.04■□□□□ -0
Shmt2Q9CZN7 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shmt2Q9CZN7 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Shmt2Q9CZN7 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Shmt2Q9CZN7 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Shmt2Q9CZN7 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Shmt2Q9CZN7 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shmt2Q9CZN7 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shmt2Q9CZN7 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.04■□□□□ -0
Shmt2Q9CZN7 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shmt2Q9CZN7 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shmt2Q9CZN7 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.03■□□□□ -0
Shmt2Q9CZN7 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.03■□□□□ -0
Shmt2Q9CZN7 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.03■□□□□ -0
Shmt2Q9CZN7 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Shmt2Q9CZN7 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Shmt2Q9CZN7 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Shmt2Q9CZN7 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Shmt2Q9CZN7 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Shmt2Q9CZN7 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Shmt2Q9CZN7 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Shmt2Q9CZN7 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.03■□□□□ -0
Shmt2Q9CZN7 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Shmt2Q9CZN7 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Shmt2Q9CZN7 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Shmt2Q9CZN7 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Shmt2Q9CZN7 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Shmt2Q9CZN7 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.03■□□□□ -0
Shmt2Q9CZN7 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Shmt2Q9CZN7 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.03■□□□□ -0
Shmt2Q9CZN7 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Shmt2Q9CZN7 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Shmt2Q9CZN7 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.03■□□□□ -0
Shmt2Q9CZN7 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.03■□□□□ -0
Shmt2Q9CZN7 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.03■□□□□ -0
Shmt2Q9CZN7 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Shmt2Q9CZN7 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Shmt2Q9CZN7 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Shmt2Q9CZN7 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.03■□□□□ -0
Shmt2Q9CZN7 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.03■□□□□ -0
Shmt2Q9CZN7 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Shmt2Q9CZN7 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Shmt2Q9CZN7 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Shmt2Q9CZN7 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.03■□□□□ -0
Shmt2Q9CZN7 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Shmt2Q9CZN7 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Shmt2Q9CZN7 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Shmt2Q9CZN7 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Shmt2Q9CZN7 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.02■□□□□ -0
Shmt2Q9CZN7 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.02■□□□□ -0
Shmt2Q9CZN7 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Shmt2Q9CZN7 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.02■□□□□ -0
Shmt2Q9CZN7 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Shmt2Q9CZN7 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Shmt2Q9CZN7 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Shmt2Q9CZN7 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Shmt2Q9CZN7 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Shmt2Q9CZN7 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.02■□□□□ -0
Shmt2Q9CZN7 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.02■□□□□ -0
Shmt2Q9CZN7 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.02■□□□□ -0
Shmt2Q9CZN7 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.02■□□□□ -0
Shmt2Q9CZN7 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Shmt2Q9CZN7 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Shmt2Q9CZN7 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Shmt2Q9CZN7 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.02□□□□□ -0.01
Shmt2Q9CZN7 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Shmt2Q9CZN7 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Shmt2Q9CZN7 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Shmt2Q9CZN7 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Shmt2Q9CZN7 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.02□□□□□ -0.01
Shmt2Q9CZN7 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shmt2Q9CZN7 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shmt2Q9CZN7 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shmt2Q9CZN7 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shmt2Q9CZN7 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shmt2Q9CZN7 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shmt2Q9CZN7 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Shmt2Q9CZN7 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Shmt2Q9CZN7 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shmt2Q9CZN7 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shmt2Q9CZN7 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shmt2Q9CZN7 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shmt2Q9CZN7 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Shmt2Q9CZN7 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Shmt2Q9CZN7 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.01□□□□□ -0.01
Shmt2Q9CZN7 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shmt2Q9CZN7 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Shmt2Q9CZN7 Gm15794-201ENSMUST00000120182 631 ntBASIC15.01□□□□□ -0.01
Shmt2Q9CZN7 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Shmt2Q9CZN7 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Shmt2Q9CZN7 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shmt2Q9CZN7 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shmt2Q9CZN7 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Shmt2Q9CZN7 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Shmt2Q9CZN7 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Shmt2Q9CZN7 BC037039-201ENSMUST00000192003 2205 ntBASIC15.01□□□□□ -0.01
Shmt2Q9CZN7 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Shmt2Q9CZN7 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms