Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trim13Q9CYB0 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trim13Q9CYB0 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trim13Q9CYB0 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trim13Q9CYB0 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim13Q9CYB0 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim13Q9CYB0 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trim13Q9CYB0 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim13Q9CYB0 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim13Q9CYB0 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.55□□□□□ -0.08
Trim13Q9CYB0 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.55□□□□□ -0.08
Trim13Q9CYB0 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.55□□□□□ -0.08
Trim13Q9CYB0 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.55□□□□□ -0.08
Trim13Q9CYB0 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim13Q9CYB0 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim13Q9CYB0 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim13Q9CYB0 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim13Q9CYB0 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim13Q9CYB0 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim13Q9CYB0 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim13Q9CYB0 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim13Q9CYB0 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim13Q9CYB0 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim13Q9CYB0 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim13Q9CYB0 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim13Q9CYB0 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim13Q9CYB0 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim13Q9CYB0 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trim13Q9CYB0 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trim13Q9CYB0 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim13Q9CYB0 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trim13Q9CYB0 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim13Q9CYB0 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim13Q9CYB0 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim13Q9CYB0 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim13Q9CYB0 Gm715-201ENSMUST00000117865 831 ntBASIC14.54□□□□□ -0.08
Trim13Q9CYB0 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim13Q9CYB0 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.54□□□□□ -0.08
Trim13Q9CYB0 Gm21814-202ENSMUST00000203277 873 ntBASIC14.54□□□□□ -0.08
Trim13Q9CYB0 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim13Q9CYB0 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim13Q9CYB0 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim13Q9CYB0 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trim13Q9CYB0 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim13Q9CYB0 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trim13Q9CYB0 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim13Q9CYB0 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim13Q9CYB0 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim13Q9CYB0 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim13Q9CYB0 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim13Q9CYB0 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim13Q9CYB0 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim13Q9CYB0 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim13Q9CYB0 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trim13Q9CYB0 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim13Q9CYB0 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim13Q9CYB0 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim13Q9CYB0 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim13Q9CYB0 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.53□□□□□ -0.08
Trim13Q9CYB0 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim13Q9CYB0 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trim13Q9CYB0 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim13Q9CYB0 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.53□□□□□ -0.08
Trim13Q9CYB0 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim13Q9CYB0 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC14.53□□□□□ -0.08
Trim13Q9CYB0 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.53□□□□□ -0.08
Trim13Q9CYB0 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.53□□□□□ -0.08
Trim13Q9CYB0 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.53□□□□□ -0.08
Trim13Q9CYB0 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.53□□□□□ -0.08
Trim13Q9CYB0 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.53□□□□□ -0.08
Trim13Q9CYB0 Gm29707-201ENSMUST00000196325 491 ntBASIC14.53□□□□□ -0.08
Trim13Q9CYB0 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim13Q9CYB0 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trim13Q9CYB0 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim13Q9CYB0 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim13Q9CYB0 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim13Q9CYB0 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trim13Q9CYB0 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trim13Q9CYB0 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim13Q9CYB0 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim13Q9CYB0 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trim13Q9CYB0 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim13Q9CYB0 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trim13Q9CYB0 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim13Q9CYB0 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim13Q9CYB0 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.08
Trim13Q9CYB0 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.52□□□□□ -0.08
Trim13Q9CYB0 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trim13Q9CYB0 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim13Q9CYB0 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim13Q9CYB0 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trim13Q9CYB0 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim13Q9CYB0 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.52□□□□□ -0.08
Trim13Q9CYB0 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim13Q9CYB0 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim13Q9CYB0 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.52□□□□□ -0.09
Trim13Q9CYB0 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim13Q9CYB0 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim13Q9CYB0 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim13Q9CYB0 Gm7370-201ENSMUST00000219471 767 ntBASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms