Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd1lQ9CXF7 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.8■□□□□ 0.44
Chd1lQ9CXF7 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Chd1lQ9CXF7 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd1lQ9CXF7 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd1lQ9CXF7 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chd1lQ9CXF7 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Chd1lQ9CXF7 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd1lQ9CXF7 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd1lQ9CXF7 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd1lQ9CXF7 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd1lQ9CXF7 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd1lQ9CXF7 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.79■□□□□ 0.44
Chd1lQ9CXF7 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chd1lQ9CXF7 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chd1lQ9CXF7 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd1lQ9CXF7 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.79■□□□□ 0.44
Chd1lQ9CXF7 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.79■□□□□ 0.44
Chd1lQ9CXF7 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Chd1lQ9CXF7 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chd1lQ9CXF7 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd1lQ9CXF7 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd1lQ9CXF7 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chd1lQ9CXF7 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Chd1lQ9CXF7 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd1lQ9CXF7 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chd1lQ9CXF7 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd1lQ9CXF7 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd1lQ9CXF7 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd1lQ9CXF7 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd1lQ9CXF7 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chd1lQ9CXF7 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd1lQ9CXF7 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chd1lQ9CXF7 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd1lQ9CXF7 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd1lQ9CXF7 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.78■□□□□ 0.44
Chd1lQ9CXF7 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.78■□□□□ 0.44
Chd1lQ9CXF7 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd1lQ9CXF7 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd1lQ9CXF7 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chd1lQ9CXF7 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chd1lQ9CXF7 Gm45760-201ENSMUST00000212190 1782 ntBASIC17.78■□□□□ 0.44
Chd1lQ9CXF7 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Chd1lQ9CXF7 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd1lQ9CXF7 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd1lQ9CXF7 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC17.78■□□□□ 0.44
Chd1lQ9CXF7 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd1lQ9CXF7 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd1lQ9CXF7 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd1lQ9CXF7 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chd1lQ9CXF7 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Chd1lQ9CXF7 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chd1lQ9CXF7 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chd1lQ9CXF7 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chd1lQ9CXF7 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Chd1lQ9CXF7 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chd1lQ9CXF7 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chd1lQ9CXF7 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chd1lQ9CXF7 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC17.77■□□□□ 0.44
Chd1lQ9CXF7 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Chd1lQ9CXF7 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chd1lQ9CXF7 Gm43697-201ENSMUST00000199637 2581 ntBASIC17.77■□□□□ 0.44
Chd1lQ9CXF7 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Chd1lQ9CXF7 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chd1lQ9CXF7 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chd1lQ9CXF7 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chd1lQ9CXF7 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chd1lQ9CXF7 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chd1lQ9CXF7 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chd1lQ9CXF7 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Chd1lQ9CXF7 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
Chd1lQ9CXF7 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Chd1lQ9CXF7 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chd1lQ9CXF7 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chd1lQ9CXF7 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chd1lQ9CXF7 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chd1lQ9CXF7 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chd1lQ9CXF7 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chd1lQ9CXF7 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chd1lQ9CXF7 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chd1lQ9CXF7 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Chd1lQ9CXF7 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Chd1lQ9CXF7 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chd1lQ9CXF7 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chd1lQ9CXF7 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chd1lQ9CXF7 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chd1lQ9CXF7 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chd1lQ9CXF7 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chd1lQ9CXF7 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chd1lQ9CXF7 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chd1lQ9CXF7 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chd1lQ9CXF7 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chd1lQ9CXF7 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chd1lQ9CXF7 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chd1lQ9CXF7 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chd1lQ9CXF7 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Chd1lQ9CXF7 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd1lQ9CXF7 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Chd1lQ9CXF7 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Chd1lQ9CXF7 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms