Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retreg3Q9CQV4 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
Retreg3Q9CQV4 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retreg3Q9CQV4 Gm25925-201ENSMUST00000158314 306 ntBASIC15.8■□□□□ 0.12
Retreg3Q9CQV4 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retreg3Q9CQV4 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retreg3Q9CQV4 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Retreg3Q9CQV4 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.8■□□□□ 0.12
Retreg3Q9CQV4 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.8■□□□□ 0.12
Retreg3Q9CQV4 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retreg3Q9CQV4 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retreg3Q9CQV4 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retreg3Q9CQV4 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retreg3Q9CQV4 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retreg3Q9CQV4 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retreg3Q9CQV4 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retreg3Q9CQV4 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retreg3Q9CQV4 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retreg3Q9CQV4 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Retreg3Q9CQV4 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.79■□□□□ 0.12
Retreg3Q9CQV4 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retreg3Q9CQV4 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retreg3Q9CQV4 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retreg3Q9CQV4 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retreg3Q9CQV4 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
Retreg3Q9CQV4 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retreg3Q9CQV4 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Retreg3Q9CQV4 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retreg3Q9CQV4 AC107452.3-201ENSMUST00000228807 1308 ntBASIC15.79■□□□□ 0.12
Retreg3Q9CQV4 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retreg3Q9CQV4 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retreg3Q9CQV4 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retreg3Q9CQV4 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retreg3Q9CQV4 Gm44357-201ENSMUST00000195897 142 ntBASIC15.79■□□□□ 0.12
Retreg3Q9CQV4 Gm19658-201ENSMUST00000196231 138 ntBASIC15.79■□□□□ 0.12
Retreg3Q9CQV4 Gm44367-201ENSMUST00000196836 138 ntBASIC15.79■□□□□ 0.12
Retreg3Q9CQV4 Gm44350-201ENSMUST00000197197 138 ntBASIC15.79■□□□□ 0.12
Retreg3Q9CQV4 Gm44390-201ENSMUST00000197533 144 ntBASIC15.79■□□□□ 0.12
Retreg3Q9CQV4 Gm44313-201ENSMUST00000198018 138 ntBASIC15.79■□□□□ 0.12
Retreg3Q9CQV4 Gm44486-201ENSMUST00000198508 138 ntBASIC15.79■□□□□ 0.12
Retreg3Q9CQV4 Gm44314-201ENSMUST00000199263 138 ntBASIC15.79■□□□□ 0.12
Retreg3Q9CQV4 Gm44394-201ENSMUST00000199558 138 ntBASIC15.79■□□□□ 0.12
Retreg3Q9CQV4 Gm44484-201ENSMUST00000199873 138 ntBASIC15.79■□□□□ 0.12
Retreg3Q9CQV4 Gm44466-201ENSMUST00000200264 138 ntBASIC15.79■□□□□ 0.12
Retreg3Q9CQV4 Gm44359-201ENSMUST00000200671 138 ntBASIC15.79■□□□□ 0.12
Retreg3Q9CQV4 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.79■□□□□ 0.12
Retreg3Q9CQV4 AW822252-206ENSMUST00000208904 237 ntBASIC15.79■□□□□ 0.12
Retreg3Q9CQV4 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC15.79■□□□□ 0.12
Retreg3Q9CQV4 Gm18622-201ENSMUST00000219361 595 ntBASIC15.79■□□□□ 0.12
Retreg3Q9CQV4 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC15.79■□□□□ 0.12
Retreg3Q9CQV4 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retreg3Q9CQV4 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retreg3Q9CQV4 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retreg3Q9CQV4 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retreg3Q9CQV4 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retreg3Q9CQV4 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retreg3Q9CQV4 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retreg3Q9CQV4 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retreg3Q9CQV4 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retreg3Q9CQV4 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retreg3Q9CQV4 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.79■□□□□ 0.12
Retreg3Q9CQV4 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retreg3Q9CQV4 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retreg3Q9CQV4 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retreg3Q9CQV4 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retreg3Q9CQV4 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retreg3Q9CQV4 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retreg3Q9CQV4 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retreg3Q9CQV4 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retreg3Q9CQV4 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Retreg3Q9CQV4 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retreg3Q9CQV4 Gm12497-201ENSMUST00000138778 237 ntBASIC15.78■□□□□ 0.12
Retreg3Q9CQV4 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.78■□□□□ 0.12
Retreg3Q9CQV4 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC15.78■□□□□ 0.12
Retreg3Q9CQV4 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retreg3Q9CQV4 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retreg3Q9CQV4 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retreg3Q9CQV4 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retreg3Q9CQV4 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retreg3Q9CQV4 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retreg3Q9CQV4 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retreg3Q9CQV4 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Retreg3Q9CQV4 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retreg3Q9CQV4 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retreg3Q9CQV4 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retreg3Q9CQV4 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retreg3Q9CQV4 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retreg3Q9CQV4 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
Retreg3Q9CQV4 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retreg3Q9CQV4 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retreg3Q9CQV4 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Retreg3Q9CQV4 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Retreg3Q9CQV4 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Retreg3Q9CQV4 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retreg3Q9CQV4 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retreg3Q9CQV4 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retreg3Q9CQV4 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
Retreg3Q9CQV4 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retreg3Q9CQV4 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retreg3Q9CQV4 Grk6-207ENSMUST00000225925 2769 ntBASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms