Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Krt88Q9CPR6 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.21□□□□□ -0.13
Krt88Q9CPR6 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Krt88Q9CPR6 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Krt88Q9CPR6 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Krt88Q9CPR6 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Krt88Q9CPR6 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Krt88Q9CPR6 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Krt88Q9CPR6 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
Krt88Q9CPR6 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Krt88Q9CPR6 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Krt88Q9CPR6 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Krt88Q9CPR6 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.14
Krt88Q9CPR6 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Krt88Q9CPR6 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Krt88Q9CPR6 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Krt88Q9CPR6 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Krt88Q9CPR6 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Krt88Q9CPR6 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Krt88Q9CPR6 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Krt88Q9CPR6 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Krt88Q9CPR6 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Krt88Q9CPR6 Gm11336-201ENSMUST00000118168 334 ntBASIC14.2□□□□□ -0.14
Krt88Q9CPR6 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.2□□□□□ -0.14
Krt88Q9CPR6 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Krt88Q9CPR6 Gm3375-201ENSMUST00000203929 796 ntBASIC14.2□□□□□ -0.14
Krt88Q9CPR6 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.2□□□□□ -0.14
Krt88Q9CPR6 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Krt88Q9CPR6 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Krt88Q9CPR6 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Krt88Q9CPR6 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Krt88Q9CPR6 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Krt88Q9CPR6 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Krt88Q9CPR6 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Krt88Q9CPR6 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Krt88Q9CPR6 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Krt88Q9CPR6 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Krt88Q9CPR6 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Krt88Q9CPR6 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Krt88Q9CPR6 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Krt88Q9CPR6 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Krt88Q9CPR6 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Krt88Q9CPR6 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Krt88Q9CPR6 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
Krt88Q9CPR6 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Krt88Q9CPR6 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Krt88Q9CPR6 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.19□□□□□ -0.14
Krt88Q9CPR6 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Krt88Q9CPR6 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Krt88Q9CPR6 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Krt88Q9CPR6 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.19□□□□□ -0.14
Krt88Q9CPR6 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.19□□□□□ -0.14
Krt88Q9CPR6 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Krt88Q9CPR6 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Krt88Q9CPR6 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.19□□□□□ -0.14
Krt88Q9CPR6 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.19□□□□□ -0.14
Krt88Q9CPR6 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.19□□□□□ -0.14
Krt88Q9CPR6 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.19□□□□□ -0.14
Krt88Q9CPR6 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Krt88Q9CPR6 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Krt88Q9CPR6 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Krt88Q9CPR6 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Krt88Q9CPR6 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Krt88Q9CPR6 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.19□□□□□ -0.14
Krt88Q9CPR6 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.19□□□□□ -0.14
Krt88Q9CPR6 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Krt88Q9CPR6 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Krt88Q9CPR6 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Krt88Q9CPR6 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.18□□□□□ -0.14
Krt88Q9CPR6 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt88Q9CPR6 BC037039-201ENSMUST00000192003 2205 ntBASIC14.18□□□□□ -0.14
Krt88Q9CPR6 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt88Q9CPR6 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Krt88Q9CPR6 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Krt88Q9CPR6 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt88Q9CPR6 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt88Q9CPR6 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.18□□□□□ -0.14
Krt88Q9CPR6 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt88Q9CPR6 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Krt88Q9CPR6 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Krt88Q9CPR6 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt88Q9CPR6 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Krt88Q9CPR6 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt88Q9CPR6 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt88Q9CPR6 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.18□□□□□ -0.14
Krt88Q9CPR6 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt88Q9CPR6 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.18□□□□□ -0.14
Krt88Q9CPR6 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Krt88Q9CPR6 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Krt88Q9CPR6 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Krt88Q9CPR6 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt88Q9CPR6 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Krt88Q9CPR6 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Krt88Q9CPR6 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Krt88Q9CPR6 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Krt88Q9CPR6 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.17□□□□□ -0.14
Krt88Q9CPR6 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt88Q9CPR6 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.17□□□□□ -0.14
Krt88Q9CPR6 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt88Q9CPR6 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms