Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim33Q99PP7 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim33Q99PP7 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim33Q99PP7 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim33Q99PP7 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.59■□□□□ 0.09
Trim33Q99PP7 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.59■□□□□ 0.09
Trim33Q99PP7 Mir6404-201ENSMUST00000183699 94 ntBASIC15.59■□□□□ 0.09
Trim33Q99PP7 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.59■□□□□ 0.09
Trim33Q99PP7 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim33Q99PP7 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trim33Q99PP7 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim33Q99PP7 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim33Q99PP7 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim33Q99PP7 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim33Q99PP7 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim33Q99PP7 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim33Q99PP7 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Trim33Q99PP7 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim33Q99PP7 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
Trim33Q99PP7 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim33Q99PP7 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim33Q99PP7 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim33Q99PP7 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.59■□□□□ 0.09
Trim33Q99PP7 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trim33Q99PP7 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trim33Q99PP7 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trim33Q99PP7 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trim33Q99PP7 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trim33Q99PP7 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trim33Q99PP7 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Trim33Q99PP7 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim33Q99PP7 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim33Q99PP7 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.58■□□□□ 0.08
Trim33Q99PP7 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim33Q99PP7 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.58■□□□□ 0.08
Trim33Q99PP7 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Trim33Q99PP7 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim33Q99PP7 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.58■□□□□ 0.08
Trim33Q99PP7 Gm15372-201ENSMUST00000120729 834 ntBASIC15.58■□□□□ 0.08
Trim33Q99PP7 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Trim33Q99PP7 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.58■□□□□ 0.08
Trim33Q99PP7 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.58■□□□□ 0.08
Trim33Q99PP7 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim33Q99PP7 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
Trim33Q99PP7 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
Trim33Q99PP7 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim33Q99PP7 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim33Q99PP7 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim33Q99PP7 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Trim33Q99PP7 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim33Q99PP7 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim33Q99PP7 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim33Q99PP7 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim33Q99PP7 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim33Q99PP7 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim33Q99PP7 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trim33Q99PP7 Gm15165-201ENSMUST00000118140 502 ntBASIC15.57■□□□□ 0.08
Trim33Q99PP7 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim33Q99PP7 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.57■□□□□ 0.08
Trim33Q99PP7 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Trim33Q99PP7 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim33Q99PP7 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trim33Q99PP7 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trim33Q99PP7 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.57■□□□□ 0.08
Trim33Q99PP7 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim33Q99PP7 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.57■□□□□ 0.08
Trim33Q99PP7 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Trim33Q99PP7 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim33Q99PP7 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim33Q99PP7 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim33Q99PP7 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trim33Q99PP7 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trim33Q99PP7 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim33Q99PP7 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
Trim33Q99PP7 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trim33Q99PP7 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.57■□□□□ 0.08
Trim33Q99PP7 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Trim33Q99PP7 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trim33Q99PP7 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim33Q99PP7 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim33Q99PP7 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim33Q99PP7 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim33Q99PP7 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim33Q99PP7 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim33Q99PP7 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim33Q99PP7 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.56■□□□□ 0.08
Trim33Q99PP7 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.56■□□□□ 0.08
Trim33Q99PP7 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim33Q99PP7 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.56■□□□□ 0.08
Trim33Q99PP7 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.56■□□□□ 0.08
Trim33Q99PP7 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.56■□□□□ 0.08
Trim33Q99PP7 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim33Q99PP7 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.56■□□□□ 0.08
Trim33Q99PP7 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim33Q99PP7 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim33Q99PP7 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Trim33Q99PP7 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim33Q99PP7 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim33Q99PP7 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim33Q99PP7 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms