Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rtn4Q99P72 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC20.06■□□□□ 0.8
Rtn4Q99P72 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rtn4Q99P72 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rtn4Q99P72 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rtn4Q99P72 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rtn4Q99P72 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rtn4Q99P72 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rtn4Q99P72 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC20.06■□□□□ 0.8
Rtn4Q99P72 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Rtn4Q99P72 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rtn4Q99P72 Gm36982-201ENSMUST00000193796 1128 ntBASIC20.06■□□□□ 0.8
Rtn4Q99P72 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC20.06■□□□□ 0.8
Rtn4Q99P72 Gm2651-201ENSMUST00000203560 838 ntBASIC20.06■□□□□ 0.8
Rtn4Q99P72 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rtn4Q99P72 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rtn4Q99P72 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC20.06■□□□□ 0.8
Rtn4Q99P72 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rtn4Q99P72 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rtn4Q99P72 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rtn4Q99P72 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rtn4Q99P72 Gm26226-201ENSMUST00000082509 116 ntBASIC20.06■□□□□ 0.8
Rtn4Q99P72 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rtn4Q99P72 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rtn4Q99P72 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rtn4Q99P72 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rtn4Q99P72 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC20.06■□□□□ 0.8
Rtn4Q99P72 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rtn4Q99P72 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rtn4Q99P72 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rtn4Q99P72 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Rtn4Q99P72 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rtn4Q99P72 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rtn4Q99P72 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rtn4Q99P72 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC20.05■□□□□ 0.8
Rtn4Q99P72 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rtn4Q99P72 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rtn4Q99P72 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rtn4Q99P72 Mir5131-201ENSMUST00000175426 93 ntBASIC20.05■□□□□ 0.8
Rtn4Q99P72 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Rtn4Q99P72 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rtn4Q99P72 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rtn4Q99P72 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
Rtn4Q99P72 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rtn4Q99P72 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rtn4Q99P72 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rtn4Q99P72 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rtn4Q99P72 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rtn4Q99P72 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rtn4Q99P72 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.05■□□□□ 0.8
Rtn4Q99P72 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rtn4Q99P72 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rtn4Q99P72 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rtn4Q99P72 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rtn4Q99P72 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rtn4Q99P72 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rtn4Q99P72 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC20.04■□□□□ 0.8
Rtn4Q99P72 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Rtn4Q99P72 Gm45212-201ENSMUST00000205831 3403 ntBASIC20.04■□□□□ 0.8
Rtn4Q99P72 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Rtn4Q99P72 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rtn4Q99P72 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rtn4Q99P72 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rtn4Q99P72 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC20.04■□□□□ 0.8
Rtn4Q99P72 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rtn4Q99P72 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rtn4Q99P72 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC20.04■□□□□ 0.8
Rtn4Q99P72 AC138767.1-201ENSMUST00000222661 415 ntBASIC20.04■□□□□ 0.8
Rtn4Q99P72 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Rtn4Q99P72 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC20.04■□□□□ 0.8
Rtn4Q99P72 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC20.04■□□□□ 0.8
Rtn4Q99P72 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rtn4Q99P72 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rtn4Q99P72 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rtn4Q99P72 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rtn4Q99P72 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Rtn4Q99P72 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Rtn4Q99P72 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rtn4Q99P72 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rtn4Q99P72 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rtn4Q99P72 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rtn4Q99P72 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rtn4Q99P72 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rtn4Q99P72 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rtn4Q99P72 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rtn4Q99P72 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rtn4Q99P72 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rtn4Q99P72 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rtn4Q99P72 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rtn4Q99P72 Gm14913-201ENSMUST00000120011 1093 ntBASIC20.03■□□□□ 0.8
Rtn4Q99P72 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
Rtn4Q99P72 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Rtn4Q99P72 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rtn4Q99P72 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC20.03■□□□□ 0.8
Rtn4Q99P72 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Rtn4Q99P72 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rtn4Q99P72 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rtn4Q99P72 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rtn4Q99P72 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Rtn4Q99P72 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms