Protein–RNA interactions for Protein: Q99N13

Hdac9, Histone deacetylase 9, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac9Q99N13 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hdac9Q99N13 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Hdac9Q99N13 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Hdac9Q99N13 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hdac9Q99N13 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hdac9Q99N13 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hdac9Q99N13 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Hdac9Q99N13 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Hdac9Q99N13 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC18.41■□□□□ 0.54
Hdac9Q99N13 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC18.41■□□□□ 0.54
Hdac9Q99N13 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hdac9Q99N13 AA543401-201ENSMUST00000164248 1269 ntBASIC18.41■□□□□ 0.54
Hdac9Q99N13 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hdac9Q99N13 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hdac9Q99N13 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hdac9Q99N13 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Hdac9Q99N13 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hdac9Q99N13 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Hdac9Q99N13 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hdac9Q99N13 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hdac9Q99N13 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Hdac9Q99N13 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hdac9Q99N13 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hdac9Q99N13 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hdac9Q99N13 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hdac9Q99N13 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hdac9Q99N13 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Hdac9Q99N13 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hdac9Q99N13 Grk6-207ENSMUST00000225925 2769 ntBASIC18.4■□□□□ 0.54
Hdac9Q99N13 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hdac9Q99N13 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC18.4■□□□□ 0.54
Hdac9Q99N13 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Hdac9Q99N13 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC18.4■□□□□ 0.54
Hdac9Q99N13 Rprl2-201ENSMUST00000157150 290 ntBASIC18.4■□□□□ 0.54
Hdac9Q99N13 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
Hdac9Q99N13 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC18.4■□□□□ 0.54
Hdac9Q99N13 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Hdac9Q99N13 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hdac9Q99N13 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Hdac9Q99N13 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC18.4■□□□□ 0.54
Hdac9Q99N13 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hdac9Q99N13 Gm29361-201ENSMUST00000183323 2000 ntBASIC18.4■□□□□ 0.54
Hdac9Q99N13 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hdac9Q99N13 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hdac9Q99N13 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hdac9Q99N13 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Hdac9Q99N13 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Hdac9Q99N13 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Hdac9Q99N13 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Hdac9Q99N13 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Hdac9Q99N13 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hdac9Q99N13 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hdac9Q99N13 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hdac9Q99N13 Gm11453-201ENSMUST00000117318 1007 ntBASIC18.39■□□□□ 0.53
Hdac9Q99N13 Gm11745-201ENSMUST00000121669 448 ntBASIC18.39■□□□□ 0.53
Hdac9Q99N13 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC18.39■□□□□ 0.53
Hdac9Q99N13 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC18.39■□□□□ 0.53
Hdac9Q99N13 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hdac9Q99N13 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18.39■□□□□ 0.53
Hdac9Q99N13 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hdac9Q99N13 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hdac9Q99N13 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC18.39■□□□□ 0.53
Hdac9Q99N13 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hdac9Q99N13 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Hdac9Q99N13 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hdac9Q99N13 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.39■□□□□ 0.53
Hdac9Q99N13 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hdac9Q99N13 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Hdac9Q99N13 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hdac9Q99N13 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Hdac9Q99N13 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.39■□□□□ 0.53
Hdac9Q99N13 Haglr-201ENSMUST00000100000 2085 ntBASIC18.38■□□□□ 0.53
Hdac9Q99N13 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Hdac9Q99N13 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
Hdac9Q99N13 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hdac9Q99N13 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.38■□□□□ 0.53
Hdac9Q99N13 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.38■□□□□ 0.53
Hdac9Q99N13 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hdac9Q99N13 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC18.38■□□□□ 0.53
Hdac9Q99N13 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC18.38■□□□□ 0.53
Hdac9Q99N13 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Hdac9Q99N13 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC18.38■□□□□ 0.53
Hdac9Q99N13 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hdac9Q99N13 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hdac9Q99N13 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hdac9Q99N13 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hdac9Q99N13 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac9Q99N13 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac9Q99N13 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Hdac9Q99N13 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac9Q99N13 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac9Q99N13 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.37■□□□□ 0.53
Hdac9Q99N13 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac9Q99N13 Gm7286-201ENSMUST00000182691 1007 ntBASIC18.37■□□□□ 0.53
Hdac9Q99N13 Mir6990-201ENSMUST00000183724 91 ntBASIC18.37■□□□□ 0.53
Hdac9Q99N13 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac9Q99N13 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hdac9Q99N13 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC18.37■□□□□ 0.53
Hdac9Q99N13 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC18.37■□□□□ 0.53
Hdac9Q99N13 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms