Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col25a1Q99MQ5 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col25a1Q99MQ5 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col25a1Q99MQ5 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.23■□□□□ 0.19
Col25a1Q99MQ5 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col25a1Q99MQ5 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col25a1Q99MQ5 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Col25a1Q99MQ5 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Col25a1Q99MQ5 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC16.23■□□□□ 0.19
Col25a1Q99MQ5 Gm24158-201ENSMUST00000175263 71 ntBASIC16.23■□□□□ 0.19
Col25a1Q99MQ5 Gm37277-201ENSMUST00000194052 1111 ntBASIC16.23■□□□□ 0.19
Col25a1Q99MQ5 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC16.23■□□□□ 0.19
Col25a1Q99MQ5 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.23■□□□□ 0.19
Col25a1Q99MQ5 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Col25a1Q99MQ5 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.23■□□□□ 0.19
Col25a1Q99MQ5 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Col25a1Q99MQ5 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col25a1Q99MQ5 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col25a1Q99MQ5 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col25a1Q99MQ5 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Col25a1Q99MQ5 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col25a1Q99MQ5 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col25a1Q99MQ5 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Col25a1Q99MQ5 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Col25a1Q99MQ5 CT025626.1-201ENSMUST00000223735 1455 ntBASIC16.22■□□□□ 0.19
Col25a1Q99MQ5 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col25a1Q99MQ5 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col25a1Q99MQ5 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Col25a1Q99MQ5 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col25a1Q99MQ5 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.22■□□□□ 0.19
Col25a1Q99MQ5 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Col25a1Q99MQ5 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col25a1Q99MQ5 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col25a1Q99MQ5 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col25a1Q99MQ5 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.22■□□□□ 0.19
Col25a1Q99MQ5 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Col25a1Q99MQ5 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.22■□□□□ 0.19
Col25a1Q99MQ5 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col25a1Q99MQ5 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col25a1Q99MQ5 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col25a1Q99MQ5 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col25a1Q99MQ5 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Col25a1Q99MQ5 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Col25a1Q99MQ5 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col25a1Q99MQ5 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col25a1Q99MQ5 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Col25a1Q99MQ5 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col25a1Q99MQ5 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col25a1Q99MQ5 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col25a1Q99MQ5 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col25a1Q99MQ5 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.21■□□□□ 0.19
Col25a1Q99MQ5 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col25a1Q99MQ5 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Col25a1Q99MQ5 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col25a1Q99MQ5 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col25a1Q99MQ5 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col25a1Q99MQ5 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col25a1Q99MQ5 Gm11478-201ENSMUST00000117851 599 ntBASIC16.21■□□□□ 0.19
Col25a1Q99MQ5 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC16.21■□□□□ 0.19
Col25a1Q99MQ5 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.21■□□□□ 0.19
Col25a1Q99MQ5 Gm8602-201ENSMUST00000184045 607 ntBASIC16.21■□□□□ 0.19
Col25a1Q99MQ5 Gm44855-201ENSMUST00000205725 362 ntBASIC16.21■□□□□ 0.19
Col25a1Q99MQ5 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col25a1Q99MQ5 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col25a1Q99MQ5 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Col25a1Q99MQ5 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col25a1Q99MQ5 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col25a1Q99MQ5 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col25a1Q99MQ5 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Col25a1Q99MQ5 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Col25a1Q99MQ5 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Col25a1Q99MQ5 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Col25a1Q99MQ5 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Col25a1Q99MQ5 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Col25a1Q99MQ5 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.2■□□□□ 0.18
Col25a1Q99MQ5 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Col25a1Q99MQ5 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col25a1Q99MQ5 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col25a1Q99MQ5 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col25a1Q99MQ5 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Col25a1Q99MQ5 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col25a1Q99MQ5 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col25a1Q99MQ5 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col25a1Q99MQ5 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Col25a1Q99MQ5 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.2■□□□□ 0.18
Col25a1Q99MQ5 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Col25a1Q99MQ5 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16.2■□□□□ 0.18
Col25a1Q99MQ5 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col25a1Q99MQ5 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col25a1Q99MQ5 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Col25a1Q99MQ5 Gm28631-201ENSMUST00000190740 334 ntBASIC16.2■□□□□ 0.18
Col25a1Q99MQ5 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col25a1Q99MQ5 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Col25a1Q99MQ5 Thap2-203ENSMUST00000218989 527 ntBASIC16.2■□□□□ 0.18
Col25a1Q99MQ5 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC16.2■□□□□ 0.18
Col25a1Q99MQ5 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col25a1Q99MQ5 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Col25a1Q99MQ5 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col25a1Q99MQ5 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Col25a1Q99MQ5 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms