Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Scrt1Q99M85 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scrt1Q99M85 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Scrt1Q99M85 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scrt1Q99M85 Gm12497-201ENSMUST00000138778 237 ntBASIC13.75□□□□□ -0.21
Scrt1Q99M85 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Scrt1Q99M85 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Scrt1Q99M85 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.75□□□□□ -0.21
Scrt1Q99M85 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.75□□□□□ -0.21
Scrt1Q99M85 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scrt1Q99M85 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Scrt1Q99M85 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scrt1Q99M85 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Scrt1Q99M85 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Scrt1Q99M85 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scrt1Q99M85 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scrt1Q99M85 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Scrt1Q99M85 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scrt1Q99M85 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scrt1Q99M85 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scrt1Q99M85 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scrt1Q99M85 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Scrt1Q99M85 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scrt1Q99M85 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Scrt1Q99M85 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Scrt1Q99M85 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Scrt1Q99M85 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scrt1Q99M85 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Scrt1Q99M85 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scrt1Q99M85 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scrt1Q99M85 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scrt1Q99M85 Gm7222-201ENSMUST00000117512 906 ntBASIC13.74□□□□□ -0.21
Scrt1Q99M85 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.74□□□□□ -0.21
Scrt1Q99M85 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.74□□□□□ -0.21
Scrt1Q99M85 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Scrt1Q99M85 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.74□□□□□ -0.21
Scrt1Q99M85 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.74□□□□□ -0.21
Scrt1Q99M85 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.74□□□□□ -0.21
Scrt1Q99M85 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Scrt1Q99M85 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.74□□□□□ -0.21
Scrt1Q99M85 Gm8655-201ENSMUST00000221159 852 ntBASIC13.74□□□□□ -0.21
Scrt1Q99M85 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scrt1Q99M85 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scrt1Q99M85 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Scrt1Q99M85 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scrt1Q99M85 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scrt1Q99M85 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scrt1Q99M85 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scrt1Q99M85 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
Scrt1Q99M85 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scrt1Q99M85 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.74□□□□□ -0.21
Scrt1Q99M85 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.74□□□□□ -0.21
Scrt1Q99M85 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Scrt1Q99M85 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scrt1Q99M85 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scrt1Q99M85 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.74□□□□□ -0.21
Scrt1Q99M85 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scrt1Q99M85 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scrt1Q99M85 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scrt1Q99M85 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Scrt1Q99M85 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scrt1Q99M85 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Scrt1Q99M85 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scrt1Q99M85 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scrt1Q99M85 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.73□□□□□ -0.21
Scrt1Q99M85 Gm14701-201ENSMUST00000117156 348 ntBASIC13.73□□□□□ -0.21
Scrt1Q99M85 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.73□□□□□ -0.21
Scrt1Q99M85 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.73□□□□□ -0.21
Scrt1Q99M85 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.73□□□□□ -0.21
Scrt1Q99M85 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.73□□□□□ -0.21
Scrt1Q99M85 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.73□□□□□ -0.21
Scrt1Q99M85 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scrt1Q99M85 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scrt1Q99M85 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Scrt1Q99M85 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scrt1Q99M85 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Scrt1Q99M85 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scrt1Q99M85 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Scrt1Q99M85 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scrt1Q99M85 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scrt1Q99M85 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Scrt1Q99M85 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scrt1Q99M85 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scrt1Q99M85 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scrt1Q99M85 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scrt1Q99M85 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Scrt1Q99M85 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.73□□□□□ -0.21
Scrt1Q99M85 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Scrt1Q99M85 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.73□□□□□ -0.21
Scrt1Q99M85 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scrt1Q99M85 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scrt1Q99M85 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.72□□□□□ -0.21
Scrt1Q99M85 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Scrt1Q99M85 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scrt1Q99M85 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scrt1Q99M85 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Scrt1Q99M85 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scrt1Q99M85 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scrt1Q99M85 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scrt1Q99M85 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms