Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp1b1Q99LU0 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp1b1Q99LU0 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp1b1Q99LU0 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp1b1Q99LU0 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp1b1Q99LU0 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp1b1Q99LU0 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp1b1Q99LU0 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp1b1Q99LU0 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp1b1Q99LU0 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Chmp1b1Q99LU0 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp1b1Q99LU0 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp1b1Q99LU0 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.87□□□□□ -0.03
Chmp1b1Q99LU0 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp1b1Q99LU0 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Chmp1b1Q99LU0 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp1b1Q99LU0 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Chmp1b1Q99LU0 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp1b1Q99LU0 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp1b1Q99LU0 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp1b1Q99LU0 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp1b1Q99LU0 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.87□□□□□ -0.03
Chmp1b1Q99LU0 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.87□□□□□ -0.03
Chmp1b1Q99LU0 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.87□□□□□ -0.03
Chmp1b1Q99LU0 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp1b1Q99LU0 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp1b1Q99LU0 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp1b1Q99LU0 Gm27704-201ENSMUST00000185094 107 ntBASIC14.87□□□□□ -0.03
Chmp1b1Q99LU0 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.87□□□□□ -0.03
Chmp1b1Q99LU0 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp1b1Q99LU0 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp1b1Q99LU0 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.87□□□□□ -0.03
Chmp1b1Q99LU0 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp1b1Q99LU0 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp1b1Q99LU0 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp1b1Q99LU0 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Chmp1b1Q99LU0 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.87□□□□□ -0.03
Chmp1b1Q99LU0 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Chmp1b1Q99LU0 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Chmp1b1Q99LU0 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp1b1Q99LU0 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp1b1Q99LU0 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp1b1Q99LU0 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Chmp1b1Q99LU0 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp1b1Q99LU0 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp1b1Q99LU0 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp1b1Q99LU0 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp1b1Q99LU0 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp1b1Q99LU0 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp1b1Q99LU0 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp1b1Q99LU0 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.86□□□□□ -0.03
Chmp1b1Q99LU0 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp1b1Q99LU0 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp1b1Q99LU0 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp1b1Q99LU0 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.86□□□□□ -0.03
Chmp1b1Q99LU0 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp1b1Q99LU0 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Chmp1b1Q99LU0 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp1b1Q99LU0 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp1b1Q99LU0 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.86□□□□□ -0.03
Chmp1b1Q99LU0 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.86□□□□□ -0.03
Chmp1b1Q99LU0 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.86□□□□□ -0.03
Chmp1b1Q99LU0 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp1b1Q99LU0 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.86□□□□□ -0.03
Chmp1b1Q99LU0 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp1b1Q99LU0 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.86□□□□□ -0.03
Chmp1b1Q99LU0 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp1b1Q99LU0 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Chmp1b1Q99LU0 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp1b1Q99LU0 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.85□□□□□ -0.03
Chmp1b1Q99LU0 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp1b1Q99LU0 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp1b1Q99LU0 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp1b1Q99LU0 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Chmp1b1Q99LU0 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp1b1Q99LU0 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp1b1Q99LU0 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp1b1Q99LU0 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp1b1Q99LU0 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp1b1Q99LU0 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp1b1Q99LU0 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp1b1Q99LU0 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp1b1Q99LU0 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.85□□□□□ -0.03
Chmp1b1Q99LU0 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp1b1Q99LU0 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp1b1Q99LU0 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp1b1Q99LU0 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp1b1Q99LU0 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp1b1Q99LU0 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp1b1Q99LU0 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp1b1Q99LU0 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp1b1Q99LU0 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp1b1Q99LU0 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp1b1Q99LU0 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp1b1Q99LU0 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp1b1Q99LU0 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp1b1Q99LU0 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp1b1Q99LU0 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp1b1Q99LU0 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp1b1Q99LU0 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms