Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdk9Q99J95 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.87■□□□□ 0.13
Cdk9Q99J95 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdk9Q99J95 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cdk9Q99J95 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdk9Q99J95 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.87■□□□□ 0.13
Cdk9Q99J95 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.87■□□□□ 0.13
Cdk9Q99J95 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdk9Q99J95 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cdk9Q99J95 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Cdk9Q99J95 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdk9Q99J95 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdk9Q99J95 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdk9Q99J95 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdk9Q99J95 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdk9Q99J95 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdk9Q99J95 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdk9Q99J95 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdk9Q99J95 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
Cdk9Q99J95 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Cdk9Q99J95 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cdk9Q99J95 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdk9Q99J95 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cdk9Q99J95 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
Cdk9Q99J95 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.86■□□□□ 0.13
Cdk9Q99J95 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdk9Q99J95 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.86■□□□□ 0.13
Cdk9Q99J95 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.86■□□□□ 0.13
Cdk9Q99J95 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdk9Q99J95 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cdk9Q99J95 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdk9Q99J95 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdk9Q99J95 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdk9Q99J95 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdk9Q99J95 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdk9Q99J95 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.86■□□□□ 0.13
Cdk9Q99J95 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdk9Q99J95 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdk9Q99J95 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdk9Q99J95 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Cdk9Q99J95 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
Cdk9Q99J95 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdk9Q99J95 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.85■□□□□ 0.13
Cdk9Q99J95 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdk9Q99J95 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdk9Q99J95 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cdk9Q99J95 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cdk9Q99J95 Gm3375-201ENSMUST00000203929 796 ntBASIC15.85■□□□□ 0.13
Cdk9Q99J95 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdk9Q99J95 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdk9Q99J95 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdk9Q99J95 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cdk9Q99J95 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.85■□□□□ 0.13
Cdk9Q99J95 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdk9Q99J95 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk9Q99J95 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk9Q99J95 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk9Q99J95 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk9Q99J95 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Cdk9Q99J95 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk9Q99J95 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk9Q99J95 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.84■□□□□ 0.13
Cdk9Q99J95 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk9Q99J95 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.84■□□□□ 0.13
Cdk9Q99J95 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk9Q99J95 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk9Q99J95 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk9Q99J95 Gm15565-201ENSMUST00000118890 427 ntBASIC15.84■□□□□ 0.13
Cdk9Q99J95 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.84■□□□□ 0.13
Cdk9Q99J95 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk9Q99J95 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk9Q99J95 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk9Q99J95 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Cdk9Q99J95 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk9Q99J95 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk9Q99J95 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk9Q99J95 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk9Q99J95 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk9Q99J95 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk9Q99J95 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk9Q99J95 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.84■□□□□ 0.13
Cdk9Q99J95 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdk9Q99J95 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cdk9Q99J95 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cdk9Q99J95 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Cdk9Q99J95 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Cdk9Q99J95 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk9Q99J95 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.83■□□□□ 0.12
Cdk9Q99J95 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk9Q99J95 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.83■□□□□ 0.12
Cdk9Q99J95 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk9Q99J95 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Cdk9Q99J95 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Cdk9Q99J95 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.83■□□□□ 0.12
Cdk9Q99J95 Krtap5-1-202ENSMUST00000188274 742 ntBASIC15.83■□□□□ 0.12
Cdk9Q99J95 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk9Q99J95 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk9Q99J95 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk9Q99J95 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdk9Q99J95 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms