Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SCAF11Q99590 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC26.63■■□□□ 1.85
SCAF11Q99590 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SCAF11Q99590 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC26.63■■□□□ 1.85
SCAF11Q99590 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC26.63■■□□□ 1.85
SCAF11Q99590 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SCAF11Q99590 POM121L3P-201ENST00000419331 1163 ntBASIC26.63■■□□□ 1.85
SCAF11Q99590 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC26.63■■□□□ 1.85
SCAF11Q99590 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC26.63■■□□□ 1.85
SCAF11Q99590 AC024563.2-201ENST00000603282 481 ntBASIC26.63■■□□□ 1.85
SCAF11Q99590 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC26.63■■□□□ 1.85
SCAF11Q99590 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC26.63■■□□□ 1.85
SCAF11Q99590 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
SCAF11Q99590 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SCAF11Q99590 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC26.63■■□□□ 1.85
SCAF11Q99590 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SCAF11Q99590 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
SCAF11Q99590 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC26.62■■□□□ 1.85
SCAF11Q99590 RPL13AP23-201ENST00000480739 586 ntBASIC26.62■■□□□ 1.85
SCAF11Q99590 AFG3L1P-217ENST00000557444 2447 ntBASIC26.62■■□□□ 1.85
SCAF11Q99590 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
SCAF11Q99590 KRT89P-201ENST00000620027 1478 ntBASIC26.62■■□□□ 1.85
SCAF11Q99590 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SCAF11Q99590 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
SCAF11Q99590 IRX1P1-201ENST00000438849 1838 ntBASIC26.62■■□□□ 1.85
SCAF11Q99590 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC26.62■■□□□ 1.85
SCAF11Q99590 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC26.62■■□□□ 1.85
SCAF11Q99590 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
SCAF11Q99590 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SCAF11Q99590 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC26.62■■□□□ 1.85
SCAF11Q99590 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SCAF11Q99590 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SCAF11Q99590 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC26.62■■□□□ 1.85
SCAF11Q99590 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
SCAF11Q99590 AC096582.2-201ENST00000510860 516 ntBASIC26.62■■□□□ 1.85
SCAF11Q99590 AL691403.2-201ENST00000618460 490 ntBASIC26.62■■□□□ 1.85
SCAF11Q99590 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SCAF11Q99590 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC26.61■■□□□ 1.85
SCAF11Q99590 AL353692.3-201ENST00000407031 1396 ntBASIC26.61■■□□□ 1.85
SCAF11Q99590 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SCAF11Q99590 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC26.61■■□□□ 1.85
SCAF11Q99590 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
SCAF11Q99590 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
SCAF11Q99590 AL512353.2-201ENST00000448759 1962 ntBASIC26.61■■□□□ 1.85
SCAF11Q99590 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
SCAF11Q99590 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SCAF11Q99590 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC26.61■■□□□ 1.85
SCAF11Q99590 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC26.61■■□□□ 1.85
SCAF11Q99590 AL355385.1-201ENST00000606123 409 ntBASIC26.61■■□□□ 1.85
SCAF11Q99590 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC26.61■■□□□ 1.85
SCAF11Q99590 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
SCAF11Q99590 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
SCAF11Q99590 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC26.6■■□□□ 1.85
SCAF11Q99590 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SCAF11Q99590 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC26.6■■□□□ 1.85
SCAF11Q99590 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
SCAF11Q99590 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SCAF11Q99590 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SCAF11Q99590 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC26.6■■□□□ 1.85
SCAF11Q99590 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC26.6■■□□□ 1.85
SCAF11Q99590 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SCAF11Q99590 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC26.6■■□□□ 1.85
SCAF11Q99590 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC26.6■■□□□ 1.85
SCAF11Q99590 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC26.6■■□□□ 1.85
SCAF11Q99590 PRKN-208ENST00000610470 531 ntTSL 2 BASIC26.6■■□□□ 1.85
SCAF11Q99590 PRKN-209ENST00000612485 225 ntTSL 5 BASIC26.6■■□□□ 1.85
SCAF11Q99590 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC26.6■■□□□ 1.85
SCAF11Q99590 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SCAF11Q99590 FAM215A-202ENST00000632077 792 ntBASIC26.6■■□□□ 1.85
SCAF11Q99590 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC26.6■■□□□ 1.85
SCAF11Q99590 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SCAF11Q99590 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC26.59■■□□□ 1.85
SCAF11Q99590 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SCAF11Q99590 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SCAF11Q99590 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
SCAF11Q99590 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
SCAF11Q99590 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC26.59■■□□□ 1.85
SCAF11Q99590 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SCAF11Q99590 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
SCAF11Q99590 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC26.59■■□□□ 1.85
SCAF11Q99590 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SCAF11Q99590 GGCT-205ENST00000409436 954 ntTSL 3 BASIC26.59■■□□□ 1.85
SCAF11Q99590 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC26.59■■□□□ 1.85
SCAF11Q99590 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC26.59■■□□□ 1.85
SCAF11Q99590 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SCAF11Q99590 AC145285.3-201ENST00000564603 959 ntBASIC26.59■■□□□ 1.85
SCAF11Q99590 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SCAF11Q99590 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SCAF11Q99590 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC26.59■■□□□ 1.85
SCAF11Q99590 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SCAF11Q99590 UBQLN4P1-201ENST00000461599 1801 ntBASIC26.58■■□□□ 1.85
SCAF11Q99590 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC26.58■■□□□ 1.85
SCAF11Q99590 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
SCAF11Q99590 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SCAF11Q99590 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SCAF11Q99590 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SCAF11Q99590 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
SCAF11Q99590 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC26.58■■□□□ 1.85
SCAF11Q99590 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SCAF11Q99590 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms